Gene Caul_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4411 
Symbol 
ID5901872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4782207 
End bp4782968 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID641564929 
ProductABC-2 type transporter 
Protein accessionYP_001686029 
Protein GI167648366 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.309984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC ACGCGATCAA GTCCATCTAC CGCTTCGAGA TGGCCCGCTG GTTCCGCACC 
CTGGCCCAGA GCGTCATCTC GCCGGTGCTG TCGACCTCCC TCTATTTCGT GGTGTTCGGC
TCGGCGATCG GCTCGCGGAT GCAGTCAATC GACGGGGTCA GCTACGCCGC CTTCATCATT
CCGGGCCTGG TCATGCTGTC GCTGCTGGGC GAGAGCATCT CCAACGCCTC GTTCGGCATC
TACATGCCCA AATGGGCCGG CACGATCTAC GAACTGCTGT CCGCGCCCGT CTCCTGGGTC
GAGACGGTGA TCGGCTATGT GGGGGCGGCG GCGACCAAGT CGGTATGCCT GGGCCTGCTG
ATCCTGGCCA CGGCCCGGCT GTTCGTGGCC TACGAGATCG CCCACCCGTT CTGGATGCTG
GCGTTCCTGA TCCTGACGGC CATCACCTTC AGTCTGTTTG GCTTCGTGAT CGGGGTCTGG
GCGACCGACT TCCAGAAGCT GCAGATCGTG CCCGCCCTGG TGGTCACGCC GCTGACCTTC
CTGGGCGGCA GCTTCTATTC GATCAGCATG CTGCCGCCGA TCTGGCAGAA GATCACCCTG
TTCAACCCGG TGGTCTATCT GGTCAGCGGC TTCCGCTGGA GCTTCTACGG CGTCTCGGAC
CTCAACCCCG TGGTCAGCTT CGCCGCCACG CTTTGCTTCC TGGCCGCGTG CCTGACGGCG
GTGTGGTGGG TGTTCAAGAC CGGGTACCGG CTGAAGACTT AG
 
Protein sequence
MNIHAIKSIY RFEMARWFRT LAQSVISPVL STSLYFVVFG SAIGSRMQSI DGVSYAAFII 
PGLVMLSLLG ESISNASFGI YMPKWAGTIY ELLSAPVSWV ETVIGYVGAA ATKSVCLGLL
ILATARLFVA YEIAHPFWML AFLILTAITF SLFGFVIGVW ATDFQKLQIV PALVVTPLTF
LGGSFYSISM LPPIWQKITL FNPVVYLVSG FRWSFYGVSD LNPVVSFAAT LCFLAACLTA
VWWVFKTGYR LKT