Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4344 |
Symbol | |
ID | 5901805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4722036 |
End bp | 4722788 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641564862 |
Product | short chain dehydrogenase |
Protein accession | YP_001685962 |
Protein GI | 167648299 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.866495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAACGC GCGGCGCGGC CCTGGTCACC GGCGCCGGCC GCCGGATCGG CCGCGCCCTA GCCCTGGAGG CCGCGCGGAG CGGGTTCGAC GTCGCCGTCC ACTACCGCAC GGCCCGGGAC GAGGCCCAGG CCGTCGCCGA CGAGATCGGG GCTCTGGGCC GCAAGGCCGT CATTCTCGAG GCCGAATTGA CGGACGAGGA CCAGGCCGCC GGCCTGATCG GCCGCGCCGC CCAGGCTCTG GGTCCCGTAA CCCTGCTGGT CAACAGCGCC TCGACCTTTG AGGACGACCG CCTGGCCACC GCCACCCGCC GAAGCTGGGA CGCCCACCTC GACGCCAACC TGCGCGCCCC GATCGTGCTG GCCCAGGCCT TCGCCAGCTT GCCCCCCCAC TTGCCAGGCC TGATCGTCAA CATCGTCGAC CAGCGCGTGC TGCGGCCCAA CCCGCAATTC TTCAGCTACA GCCTGTCCAA GGCCGGCCTG TGGTGGGCGA CCCAGACCCT GGCCCAGGAC CTGGCCCCGC GCATCCGCGT CAACGCCATC GCGCCCGGGC CGGTGCTGGC CTCGGTGCAT CAAGCCCCCG GCGAGTTCGA ACGCGAGGCG GCCGGAACGC CGCTGGGCCA CCCCGTTTCG CCGGACGACG TCGCCGCCGC GCTGCGCTAC CTCATTGACG CGACCTCGGT CACGGGCCAG ATGATCGCGG TCGACGCGGG CCAGCACCTG GGCTGGCGCA CGCCCGACAT CATCGGTTCC TGA
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Protein sequence | MTTRGAALVT GAGRRIGRAL ALEAARSGFD VAVHYRTARD EAQAVADEIG ALGRKAVILE AELTDEDQAA GLIGRAAQAL GPVTLLVNSA STFEDDRLAT ATRRSWDAHL DANLRAPIVL AQAFASLPPH LPGLIVNIVD QRVLRPNPQF FSYSLSKAGL WWATQTLAQD LAPRIRVNAI APGPVLASVH QAPGEFEREA AGTPLGHPVS PDDVAAALRY LIDATSVTGQ MIAVDAGQHL GWRTPDIIGS
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