| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4272 |
|---|
| Symbol | |
|---|
| ID | 5901733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4642819 |
|---|
| End bp | 4644477 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641564791 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_001685891 |
|---|
| Protein GI | 167648228 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.43547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCT CCCGTCGCGC CGCCCTCGCC GGCGTCGCCC TGCTGTTGAC CGTCCAACCT
GTTTTCGCCG CGCCCGTCGC CAAGGCCAAA CCCGCCGCCA CCAAGCCAGC CGCCAGCTTC
ACGCCCTCAC CGGCCGCTAT CAAGGCGCAT ATGAGCTTCC TGGCCGACGA CCTGCTGGAA
GGCCGCGAGT CCGGCACGCG CGGCTACGAC ATCGCCGCCA ACTACGTGGC TTCGCAATAT
GCGGTGATGG GCGTCAAGCC GGCCGGCGAC AACGGCTCCT ACCTGCAGCA GGTGCCGCTG
ACGGCCTATC GCTCGGTCAA CGAGGGCGGG GTGTCCTACA CCACCGCCGA CGGCAAGTCC
GGCGCCCTGA CCTTCGGCGA GGACTACCTG CCGTCCGCCC AAGCCCGCCA GGCCGACACC
TCGGTGACCG CCCCGCTGGT CTTCGTCGGC TACGGGATCA ACGCCCCCGA GCGCGGTCGC
GACGACTATG CCGGCCTGGA CGTGAAGGGC AAGATCGTCG TCCTGCTGAC CGGCGCGCCC
AGCGGCTTCC AGACCGAGAT CCGGGCCCAC TACAGCAACA CCAACGTCAA GCGGGCCGAG
GCGGCCAGGC GCGGCGCGGT CGGGGTCATC ACCCTGCCGA CCACCAGCTC CGAGAAGCGC
CGCCCATTCG AGCGCGGCGT AGCCAACTAC CAGGAATGGA AGATGACCTG GAGCGACGCC
CGGGGCGTGG CCTATGTGCG CGGCGCCGAG GCGCCGGGCC TGGCCACCCT GAGCCTGAAG
GGCGGCGCCA AACTGTTCAC CGGCGCCCCG GTCACCCTGG AAAGCGTGCT GGCCGAGGCC
GAGACGCCGG AAGGTCTGGT CAAGGGCTTC GACCTGCCTG TCAACGTGAC GATCCAGCTG
AAGACCGAGA TCGAGAAGCG CCGGAGCAGC AACGTGGTCG GCCTGATCGA AGGCTCGGAC
CCGACCCTGA AGGCCCAGAC CATCATCCTC AGCGCCCACC TCGACCACCT GGGCATTCAC
GGCAAGGACG CCGACAAGAT CAACAACGGC GCGCTGGACA ACGCCTCGGG CGTCGCGACG
ATGCTGGAGG TGGCCCGAGG CTTCAAGGAA GCCAAGACCA AGCCCAAGCG CTCGATCGTC
CTGCTGGCGG TCACGGCCGA GGAAAAGGGC CTGATCGGCT CGGAATATTT CGCCAACAAC
CCGACCGTGC CGAAGGCCGG CATCGCCGCC GACGTCAATC TGGACATGCC GATCCTGCTG
TACGACTTCC AGGACGTGAT CGCCTTCGGC GCCGACCGCT CGTCGATCGG CCCGGCCGTG
GCCCGCGCCG CTGGCCGCGT CGGCATCGGC CTGTCGGCCG ACCCGCTGCC GGAAGAGGGC
CTGTTCACCC GCTCGGACCA CTATCGCTTC GTCGAGCAGG GCGTGCCGTC GGTGTTCCTG
ATGACCGGTT TCAAGAACGG CGGCGAAAAG GGCTTCAAGG ACTTCCTGGC CACGCATTAC
CACAAGCCCA ACGACGACCT GAACCAGCCG ATCAACTACG AGGCCGGCGC CCGCTTCGCC
CTGGTCAATT ACGAGATCGC CCGCGAGCTG GCCGACATGC CGGCCCGTCC GAGCTGGAAC
AAGGGCGACT TCTTCGGGAC GCTGTTCGGG AAGAAGTAG
|
|---|
| Protein sequence | MPFSRRAALA GVALLLTVQP VFAAPVAKAK PAATKPAASF TPSPAAIKAH MSFLADDLLE
GRESGTRGYD IAANYVASQY AVMGVKPAGD NGSYLQQVPL TAYRSVNEGG VSYTTADGKS
GALTFGEDYL PSAQARQADT SVTAPLVFVG YGINAPERGR DDYAGLDVKG KIVVLLTGAP
SGFQTEIRAH YSNTNVKRAE AARRGAVGVI TLPTTSSEKR RPFERGVANY QEWKMTWSDA
RGVAYVRGAE APGLATLSLK GGAKLFTGAP VTLESVLAEA ETPEGLVKGF DLPVNVTIQL
KTEIEKRRSS NVVGLIEGSD PTLKAQTIIL SAHLDHLGIH GKDADKINNG ALDNASGVAT
MLEVARGFKE AKTKPKRSIV LLAVTAEEKG LIGSEYFANN PTVPKAGIAA DVNLDMPILL
YDFQDVIAFG ADRSSIGPAV ARAAGRVGIG LSADPLPEEG LFTRSDHYRF VEQGVPSVFL
MTGFKNGGEK GFKDFLATHY HKPNDDLNQP INYEAGARFA LVNYEIAREL ADMPARPSWN
KGDFFGTLFG KK
|
|---|
| |