| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4265 |
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| Symbol | |
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| ID | 5901726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4636092 |
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| End bp | 4638041 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641564784 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001685884 |
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| Protein GI | 167648221 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.914604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.695759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA CGACGACTGA CGGAGCCGAA CCGCCCGAAA CCGGTGGCGG GGATGGCCCC
CTGCTCGACC TGACCGACGC CGGCGTCAAG AAGTTCATCA AGCAGGCCAA GGCCCGCGGC
TACGTCACCA TGGACGAGCT GAACAAGGTC CTGCCGTCGG AAGAAGTGAC CTCCGAGGCC
ATCGAAGACA CCCTCGCCAT GCTGAGCGAG ATGGGCGTCA ACGTGGTCGA GGCCGAAGAA
GACGCTGAAA CCTCCGAGGG CGGCGAAGTC GTCGCCCGCG AGGACAACCA GCAGGTCATC
ACCAGCGACA AGCCGGCGGC CTATGACCGC ACGGACGATC CCGTGCGCAT GTACCTGCGC
GAGATGGGCA GCGTCGAGCT GCTGTCGCGC GAGGGCGAAA TCGCCATCGC CAAGCGCATC
GAGGCCGGCC GCGACACCAT GATCCGGGGT CTGTGCGAAA GCGCCCTGAC CTTCGAAGCC
ATCATGGTCT GGCGCGAGGA ACTGGGCACC GGCCGCATCC TGCTGCGCGA AGTGATCGAC
CTGGAAGGCA CCTACGCCGC CATCAACGGC GTGGCCGCCG CGCCCGCCGC CGACGACGAG
CCGGCCGAGC CGTCGGACGA GGAACCCGGC AGCGAACCCA AGGCCGAGGG CGAGGAAGAC
GAGGACGATT TCGACGATGG CGCCGGCCCG ACGGTCAGCG CCATGGAAGG CGAACTGCGC
GAAGGCGTGA TGGCCATCCT CGACGCGATC GCCAGCGAGT TCGAAACCTT CCGCAAGCTG
CAGGACAAGT TGGTCGGCAG CCGCCTGAAG GGCGCGGACC TCTCGGACGC CGACCGCAAG
GCCTATGAGG GCCTGTCGAA CACCATCATC CAGCACCTCA AGACGCTGAA GCTGAACAAC
AACCGCATCG AGGCGCTGGT CGAGCAGCTC TATGCGATCA ACAAGCGCCT GATCGGCCTG
GAAGGCCGGC TGCTGCGCCT GGCCGACAGC TACGGCATCA GCCGCAGCGA GTTCCTCAAG
GCCTATTTCG GTTCGGAGCT GAACCCGAAC TGGATCGACC AGGTCAAGGC CATGGGCGTG
CGCTGGACCA AGTTCGTCGA GAACGACACC AACTCGGTCG GCGACATCCG TCAGGAAATC
GCCGCCCTGG CCACCGAGAC CGGCGTGCCG ATCGACGATT ATCGCCGCAT CGTCCAGACC
GTGCAGAAGG GCGAACGCGA GGCCCGGCAG GCCAAGAAGG AGATGGTGGA AGCCAATCTC
CGTCTCGTGA TCTCGATCGC CAAGAAGTAC ACCAACCGCG GCCTGCAGTT CCTGGACCTG
ATCCAGGAAG GCAATATCGG CCTGATGAAG GCTGTCGATA AGTTCGAATA TCGCCGCGGC
TACAAGTTCT CGACCTACGC CACCTGGTGG ATCCGTCAGG CGATCACCCG CTCGATCGCC
GACCAGGCGC GGACCATCCG CATCCCGGTG CACATGATCG AGACGATCAA CAAGATCGTC
CGCACCAGCC GCCAGATGCT GCACGAGATC GGCCGCGAGC CGACCCCGGA AGAGCTGGCC
GAAAAACTGG CCATGCCGCT GGAGAAGGTG CGCAAGGTCC TGAAGATCGC CAAGGAGCCG
ATTTCGCTCG AAACCCCGAT CGGGGACGAG GAAGACAGCC ACCTGGGCGA CTTCATCGAG
GACAAGAACG CCATCCTGCC GATCGACGCG GCCATCCAGT CCAACCTGCG GGAAACCACC
ACCCGCGTGC TGGCCTCGCT GACCCCGCGT GAAGAGCGCG TCCTGCGCAT GCGTTTTGGC
ATCGGCATGA ACACCGACCA CACCCTGGAA GAGGTGGGCC AGCAGTTCTC GGTCACCCGC
GAACGCATCC GCCAGATCGA GGCCAAGGCC CTGCGCAAGC TCAAGCACCC GAGCCGGTCG
CGCAAGCTGC GGTCGTTCCT GGACTCCTAA
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| Protein sequence | MSTTTTDGAE PPETGGGDGP LLDLTDAGVK KFIKQAKARG YVTMDELNKV LPSEEVTSEA
IEDTLAMLSE MGVNVVEAEE DAETSEGGEV VAREDNQQVI TSDKPAAYDR TDDPVRMYLR
EMGSVELLSR EGEIAIAKRI EAGRDTMIRG LCESALTFEA IMVWREELGT GRILLREVID
LEGTYAAING VAAAPAADDE PAEPSDEEPG SEPKAEGEED EDDFDDGAGP TVSAMEGELR
EGVMAILDAI ASEFETFRKL QDKLVGSRLK GADLSDADRK AYEGLSNTII QHLKTLKLNN
NRIEALVEQL YAINKRLIGL EGRLLRLADS YGISRSEFLK AYFGSELNPN WIDQVKAMGV
RWTKFVENDT NSVGDIRQEI AALATETGVP IDDYRRIVQT VQKGEREARQ AKKEMVEANL
RLVISIAKKY TNRGLQFLDL IQEGNIGLMK AVDKFEYRRG YKFSTYATWW IRQAITRSIA
DQARTIRIPV HMIETINKIV RTSRQMLHEI GREPTPEELA EKLAMPLEKV RKVLKIAKEP
ISLETPIGDE EDSHLGDFIE DKNAILPIDA AIQSNLRETT TRVLASLTPR EERVLRMRFG
IGMNTDHTLE EVGQQFSVTR ERIRQIEAKA LRKLKHPSRS RKLRSFLDS
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