Gene Caul_4225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4225 
Symbol 
ID5901686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4591408 
End bp4592538 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content65% 
IMG OID641564745 
Producthigh-affinity nickel-transporter 
Protein accessionYP_001685845 
Protein GI167648182 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.786364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC TCGCCGACCT CTTTGCCCAG GGCGCCGCAC ACGCCTGGCT CTTTATTCCG 
TCGGCGCTTC TCTTGGGGGC GCTGCACGGC CTCGAGCCCG GCCACTCCAA AACCATGATG
GCGGCGTTCA TCGTGGCGGT GCGCGGCACC GTGCTGCAGG CGGTGCTGCT GGGCCTTTCG
GCGACGCTGT CCCATACCGC CATCGTCTGG GCGATCGGCC TGGCGGGGCT CTATTTTGGC
CGCAACCTCG ACCTGCAGAC CGCCGAACCC TGGTTCCAGT TGGCCTCCGC GCTGATCATC
ATCGCGGTCG CTTCGTGGAT GATCTGGCGG ACGTGGCGCG AGCAGCAGGC GACCGAACAT
GAACATGACC ATGGTCATCA CCGCCACAAC CATGACGAGA CTCGCGTCAT CGACAGTGGG
CACGGCGTAG TCGAACTGAG CATTTTCGAG GAAGGCCAGG CGCCGACCTT CCGGCTGGCG
GCCCGATCCG GTCACCTTCC GCGCGCTTCG GAAGTGACCG TGACGACGAC GCGAGACGAC
GGCGCGAGCC AAGTCTTCAG GTTCGTCGCC AGGGAAGGGC TCACCAAGGG CGGGTTTCTG
GAGTCGACGA CCGACATTCC AGAGCCGCAC GCCTTTGCCG CGCGCCTGAC GATCTCCCAC
GGCCACCACA GCCATGATTT CGATGTCGAC TACAGCGAGG ATGGCCATCA TCACGGCCAC
GATGGCTTGG ATGTCTCTTC GCCGGGCTTC CAGGACGCGC ACGAGCGCGC TCACGCCAAC
GACATCAAGC GCCGTTTCGC CGGCCAGCAG GTCACGACCG GCCAGATCAT CCTGTTTGGC
CTGACCGGCG GACTGATCCC CTGTCCCGCG GCCATCACCG TTCTGTTGCT CTGTTTGCAG
CTCAAGCAGG TGGCGCTGGG CGCGACCCTG GTCCTATGCT TTTCGACCGG CTTGGCCGTG
ACCATGGTCT CGGTCGGCGT CGCAGCCGCC ATCGGCGTGC GCCACGCCGA AAAACGCTTT
GCGGGCGCCT TCGCGACCTT CGCCCGCCGC GCGCCCTATG CCTCTGGCGC CCTCATCATC
ATTGTCGGAT CCATACTGGC GTTCCAGGCC GTGCGAGGAA TCCTGGGATG A
 
Protein sequence
MTSLADLFAQ GAAHAWLFIP SALLLGALHG LEPGHSKTMM AAFIVAVRGT VLQAVLLGLS 
ATLSHTAIVW AIGLAGLYFG RNLDLQTAEP WFQLASALII IAVASWMIWR TWREQQATEH
EHDHGHHRHN HDETRVIDSG HGVVELSIFE EGQAPTFRLA ARSGHLPRAS EVTVTTTRDD
GASQVFRFVA REGLTKGGFL ESTTDIPEPH AFAARLTISH GHHSHDFDVD YSEDGHHHGH
DGLDVSSPGF QDAHERAHAN DIKRRFAGQQ VTTGQIILFG LTGGLIPCPA AITVLLLCLQ
LKQVALGATL VLCFSTGLAV TMVSVGVAAA IGVRHAEKRF AGAFATFARR APYASGALII
IVGSILAFQA VRGILG