Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4190 |
Symbol | |
ID | 5901652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4554196 |
End bp | 4555710 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641564712 |
Product | type II secretion system protein E |
Protein accession | YP_001685812 |
Protein GI | 167648149 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGCA AGCGCGACCA GGCCGCCGTT CGGACAGAGC AGGCGCCGCC GCCCGTCTCC AACGATGGGC CGGCCATCGC CACGCGCCCG CAGCGCGTCG ATCCCGCCGC CAACGAGCCG GCCGCCACCG CCGCGCCCAG CCCCGCGCCC GGCAAGGCGG CGGGTCCCAG GGTCACCAAC GGCCTGGAAC AACTGCGCGC CGCCCAGGGC GCGCCGCCGA CCACCAACGT GGTCCGCGAG CAGAGCGACT ATTACCACGC CACCAAGACC ACGATCTTCA ACGCGCTGCT CAACACCATC GACCTGAGCC AACTGGCCCA ACTGGACCTG AAGGCGGCGG CCGAAGAGAT CCGCGACATC GTCGCCGAGC TGGTGGCGAT CAAGAACGTC TCGATGTCGG TCTCCGAGCA GGAGCACCTG GTCCAGGACA TCATCAACGA CGTCCTCGGC TATGGCCCGC TCGAGCCCCT GCTGGCCCGC GACGACATCG CCGACATCAT GGTCAACGGC GCACACCGGG TGTTCATCGA AGTCGGCGGC AAGGTCCAGC TGACCAATGT CCGCTTCCGC GACAATCTGC AGCTGATGAA CATCTGCCAG CGGATCGTCA GCCAGGTCGG CCGCCGGGTC GACGAAAGCA GCCCGATCTG CGACGCCCGC CTGCCCGACG GCAGCCGCGT CAACGTCATC GCTCCGCCCT TGGCGCTGGA TGGTCCCACC CTGACCATCC GCAAGTTCAA GAAGGACAAG CTGACGATGA AGAACCTGGT CGACTACGCG TCGATCAGCC CGGAAGGGGC GCGGGTCCTG GGCGTGATCG GCGCCTGCCG CTGCAACATC GTCATCTCGG GCGGCACCGG CTCGGGCAAG ACCACCCTAC TCAACACCAT GACCGCCTTC ATCGACCCGA CCGAGCGGGT GGTGACCTGC GAGGACGCGG CCGAACTGCA GCTGCAGCAG CCGCACGTGG TGCGCCTGGA AACCCGGCCG CCGAACCTGG AAGGCCAGGG CGCGGTGACC ATGCGCGACC TGGTCAAGAA CTGCCTGCGG ATGCGTCCCG AACGGATCAT CGTCGGCGAA GTCCGCGGCC CGGAGGCGTT CGACCTGTTG CAGGCCATGA ACACCGGCCA CGACGGATCG ATGGGCACGC TGCACGCCAA CAGCCCGCGC GAGGCGATCA GCCGGATCGA GAGCATGATC ACCATGGGCG GCTACGGCCT GCCCTCCAAG ACCATCAAGG AGATGATCGT CGGTTCGGTC GACGTCATCA TCCAGGCCGC CCGCCTGCGC GACGGCACGC GCCGCATCAC CCACATCACC GAGGTGGTGG GGCTGGAAGG CGACGTGATC GTCACCCAGG ATCTGTTCGT CTACGAGATC AGCGGCGAGG ACGCCGCAGG TAACGTGGTC GGCAAGCACC GCTCGACAGG GATCGGCCGC CCCCGGTTCT GGGACCGCGC CCGCTATTAC GGCCTGGAGC GCGAGCTGGC CGAAGCCCTC GACGCGGCGG AGTAG
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Protein sequence | MFGKRDQAAV RTEQAPPPVS NDGPAIATRP QRVDPAANEP AATAAPSPAP GKAAGPRVTN GLEQLRAAQG APPTTNVVRE QSDYYHATKT TIFNALLNTI DLSQLAQLDL KAAAEEIRDI VAELVAIKNV SMSVSEQEHL VQDIINDVLG YGPLEPLLAR DDIADIMVNG AHRVFIEVGG KVQLTNVRFR DNLQLMNICQ RIVSQVGRRV DESSPICDAR LPDGSRVNVI APPLALDGPT LTIRKFKKDK LTMKNLVDYA SISPEGARVL GVIGACRCNI VISGGTGSGK TTLLNTMTAF IDPTERVVTC EDAAELQLQQ PHVVRLETRP PNLEGQGAVT MRDLVKNCLR MRPERIIVGE VRGPEAFDLL QAMNTGHDGS MGTLHANSPR EAISRIESMI TMGGYGLPSK TIKEMIVGSV DVIIQAARLR DGTRRITHIT EVVGLEGDVI VTQDLFVYEI SGEDAAGNVV GKHRSTGIGR PRFWDRARYY GLERELAEAL DAAE
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