| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4116 |
|---|
| Symbol | |
|---|
| ID | 5901578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4472683 |
|---|
| End bp | 4473792 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641564637 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_001685738 |
|---|
| Protein GI | 167648075 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.712365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.318917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCGA TGCCCCACCT TCTCCCCGAT CGGCGGGCGC TGATCGCCGG CCTGCTGGCC
AGTCTGGCCA GCGGATCGAC GGGCGCCCTG GGAGCCGAGC CACGCTTCAA GGCCCCCGTC
GTCGATCAGC TGACGCTGCA AGTGCTGATC GACAACGCGA CCTTCGGCCC CTTCCTGCCC
AACCTGACCT TGCCGGGCCT TGAGGTGCGC CGCGAGACCG GCGACCGGAG CCCCCGGATG
TCCCGCCAGG CGCTGAAGGC CGAGTTTGGC CTGTCGATCC TGGGCACATC GCGGATCGGG
GACCAGACCC GGCGCGTGCT GGTGGATTTT GGCTACACAC CCGAGACCCT GACCAACAAC
CTCGCCTTGC TGGGCCTCGA CCCGGATCAG TTCGACGCGG CGGTGCTGAG CCACGGCCAT
CTGGACCACT ATGGCGGCTT CGCCGGCCTG TTCGCCGGCC GCGCGGCCAA GGACCGCCAC
CTGCCGCTCT ATGTGGGCGG CGAGGAGACC TTCTGCGAGC GGGTGACGAT GATCGCCTCG
CCCCCGCCCG TGATGGGGGC TCTGGATCGC GGCGAGCTGG CCCGGGCCGG GCTACAGGTG
CGCATCGCGC CTGAGCCCGC CGTGGTCGCC GACCAGGCCT TCACCACCGG CGTCATCCCG
CTGAAGTCGT TCGAACGCGC CGCCATACCC ACCGCCATGC GCGCCGGGGT CGGCTGCGAC
GCGGCCAAGC TGTCGCCGGG CAAGCGCGAC GGCCAGACGC CCGACGACGG CGAGCACGAA
TTGGCCACCT GCTACGTGGT CAAGGACCTG GGCCTGGTGG TGGTGTCCTG CTGCAGCCAC
CGGGGCGTGC TCAACGCCGT CCGGCAGGCC CAGGCGCTAT CGGGGGTCGA CAAGGTCCAC
GCCGTGGTCG GCGGCTTCCA CCTGGTGCGC CCACGCACCG ACGACGAGGC CCGGCGCACC
GCGGCCGAAT TCGTCAAGAT CGATCCGACC TACATCATCC CGATGCACTG CACCGGCGAG
GTGTTCATCG CCGAGGCGAC GCGGCTGATG CCAAACAAGG TGATCCGCCC CTATGTGGGC
ACCCAGCTGG TGTTCGCCGC GAAGGCGTGA
|
|---|
| Protein sequence | MPSMPHLLPD RRALIAGLLA SLASGSTGAL GAEPRFKAPV VDQLTLQVLI DNATFGPFLP
NLTLPGLEVR RETGDRSPRM SRQALKAEFG LSILGTSRIG DQTRRVLVDF GYTPETLTNN
LALLGLDPDQ FDAAVLSHGH LDHYGGFAGL FAGRAAKDRH LPLYVGGEET FCERVTMIAS
PPPVMGALDR GELARAGLQV RIAPEPAVVA DQAFTTGVIP LKSFERAAIP TAMRAGVGCD
AAKLSPGKRD GQTPDDGEHE LATCYVVKDL GLVVVSCCSH RGVLNAVRQA QALSGVDKVH
AVVGGFHLVR PRTDDEARRT AAEFVKIDPT YIIPMHCTGE VFIAEATRLM PNKVIRPYVG
TQLVFAAKA
|
|---|
| |