Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4112 |
Symbol | |
ID | 5901574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4468264 |
End bp | 4468776 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641564633 |
Product | CarD family transcriptional regulator |
Protein accession | YP_001685734 |
Protein GI | 167648071 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00258914 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.616295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGA GCGGTCTGGA ATTCTCGGTC GGCGATCACG TCGTTTATCC CGCGCATGGC GTGGGCAGCA TCCAGGGCGT CGAGACCCAG GAAGTGGCCG GGATGTCGCT CGAGGTCTAT ATCATCACCT TCGACCACGA AAAGATGACC CTGCGCGTGC CGACCAAGAA GGCCAAGACC GCCGGTCTGC GCCCGCTGGC CGAAGGCAAT GTGGTGTCGC AAGCCCTGAC CACCCTGAAG GGCCGCGCCC GCGTCAAGCG CACCATGTGG TCGCGTCGCG CCCAGGAATA CGAAGCCAAG ATCAATTCGG GCGACCTGAT CTCGATCGCC GAAGTGGTGC GCGACCTGCA CCGCGCCGAG AACCAGCCGG AACAGTCCTA TTCGGAGCGT CAGCTGTACG AATCGGCCCT GGACCGCATG GCCCGCGAAG TCGCCGCCAT TGAGCGCATC GACCGCGAAG CCGCCATCGG CATCCTGACC AAGTCGCTGG TCAAGACCGC CGCCGCCGCC TGA
|
Protein sequence | MSKSGLEFSV GDHVVYPAHG VGSIQGVETQ EVAGMSLEVY IITFDHEKMT LRVPTKKAKT AGLRPLAEGN VVSQALTTLK GRARVKRTMW SRRAQEYEAK INSGDLISIA EVVRDLHRAE NQPEQSYSER QLYESALDRM AREVAAIERI DREAAIGILT KSLVKTAAAA
|
| |