Gene Caul_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4099 
Symbol 
ID5901561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4452285 
End bp4452827 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content68% 
IMG OID641564619 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001685721 
Protein GI167648058 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAC CTCGCGCTTC CATCGCGCTC GCGGAATCCG CATCGCCCCG GCCTGACCTG 
GGCGCATGGA TGGTCACCCA CGGCGCCCGA TTGCGTCGGT ACTTTTCACG GCGAGCGCCG
CGCGCCGAAG CCGAGGACCT GGTGCAGGAT GTCTTCCTGC ATGTGCAGGC CGCGCGCCTG
GACAGCCCCA TTGTCGAGGT CGAGCGCTAC CTGTTCACCG TCGCCCACAA TGTGCTGGTC
AGCCACGCCC GGCGCCGGCG AGGCGGCTCG GTCGACGCCC AGCGCACGCT ATGGGAGTTT
TCGGAAGCGG CCGGAGGCCT GTCGCCTGAA CGGATTCTCA GCGCGCGACA GGACTATGCT
CGCGTCATGG CCGTCATCGA ACGCCTGCCG CCGCGCACGC GCCTGGCGTT CCGCCTGAAC
CGCTTCGAAG AGCTCAGCTA TGGGGCGATC GCCGAGCGGA TGGGCATCAC CAAGGACTCC
GTGAAGGAAC TCCTGCGTCG CGCCCATGCG CATCTCGATC AAGCCGTGAA GCGCGACACC
TAG
 
Protein sequence
MASPRASIAL AESASPRPDL GAWMVTHGAR LRRYFSRRAP RAEAEDLVQD VFLHVQAARL 
DSPIVEVERY LFTVAHNVLV SHARRRRGGS VDAQRTLWEF SEAAGGLSPE RILSARQDYA
RVMAVIERLP PRTRLAFRLN RFEELSYGAI AERMGITKDS VKELLRRAHA HLDQAVKRDT