| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4078 |
|---|
| Symbol | |
|---|
| ID | 5901540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4420820 |
|---|
| End bp | 4421770 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641564599 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001685701 |
|---|
| Protein GI | 167648038 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.53105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAC CGGGTGATCA AGACAGAGAC GCGCTGATCG CCGAGGCTTC GCTGTGGCTG
GCGCGCCTCG ACGCCGGTCG TGCTTCCGAA CAGGACCTGG ACGCCTGGCG CGACGCCGAT
CCGCGCCGCG CGGCGGCCTT CGCCGAGGTG GCCAGCGCAT GGACGCGGCT GGACGCCCTG
CGCGAGGCCG AGGACCGGCC GCTGCCGAAA CCCAGCCGTC GAGCCTGGCT GGCCGGCGGC
GGCGCGGCCT TGGCGGCCAG CGTGGTCGGC GGCGCCTGGC TGGGCCGCGA CATCCTGCTG
CGCGACCGCG TCGTCACCGG GGTGGGCGAG CGCCGCACCC TGGCCCTGCC CGACGGCAGC
TCGGTCGAGC TCAACACCGA CACCGAGGTC TTCTGGCGGT TCGACCGCAC GCGGCGGCGG
CTGTGGCTGT CGCGCGGCGA GGCGGCGTTG ATGATCGTCC ACGACCGGCT GCGGCCGTTC
GAGCTGTTCA CATCCCAAGG TTTGGCCCGA TTGGCCGCTG GCCAATTCAA CGCCCGCCTG
CGGCCAGCAG GGCTGGACCT GATCGTGCTG GCCGGCGAGG CGGTGGTCGA GACCGCGACG
GGGGCGGCCC AGGCCCAGGT GTCCCGCCCG GCCGACGCCC GCCAGGCGCT GGAGGTCACC
GCCCAGCGCA TCGCCGTGGT CGCCACGCCC GAGGCCGAGG TCCAGAGCGT CCAGGCCTGG
CGGCGCGGCG AGATCGTCTT CGAGGGCCAG GCCCTGTCGG CCGCCGTCGA GGAATATAAC
CGCTACCTGA CCCGCAAGCT GGTGATCGGC GACGACAAGG CCGGCCGACT GCGTCTGGGC
GGGCGCTTCC TGACCGGCGA CCCCGACAGC TTCCTGGACG CCCTGCGCAC GACCTTCGGT
CTACGGATCA TCGACGACGG ATCGTCGCGA ATTCTTCTTA AATCTCGATA G
|
|---|
| Protein sequence | MARPGDQDRD ALIAEASLWL ARLDAGRASE QDLDAWRDAD PRRAAAFAEV ASAWTRLDAL
REAEDRPLPK PSRRAWLAGG GAALAASVVG GAWLGRDILL RDRVVTGVGE RRTLALPDGS
SVELNTDTEV FWRFDRTRRR LWLSRGEAAL MIVHDRLRPF ELFTSQGLAR LAAGQFNARL
RPAGLDLIVL AGEAVVETAT GAAQAQVSRP ADARQALEVT AQRIAVVATP EAEVQSVQAW
RRGEIVFEGQ ALSAAVEEYN RYLTRKLVIG DDKAGRLRLG GRFLTGDPDS FLDALRTTFG
LRIIDDGSSR ILLKSR
|
|---|
| |