Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4058 |
Symbol | lspA |
ID | 5901520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4392261 |
End bp | 4392770 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641564579 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001685681 |
Protein GI | 167648018 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.113935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.943732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGA TCACCCGCCT CGGCTGGACC GCCTACGCCA TCGCGATCGC CACGATCGTG CTGGACCAGA TCAGCAAGGC CTGGATCCTG GTCACGCTGG GCACCACCCA AGGCGCCAGC CAGCCGGTGT TCGGCCCGCT CTACCTGACC CTGGTCCATA ACCAGGGCAT GAGCTTTGGC CTGTTTCGCG GGTCGGAGGT CAGCCGCTGG CTGCTGACGA TCTTCTCGGC CGCCGTGGTC GTCGGCCTGG CGATCTGGGC GCGCAAGGCG GTCAAGCCGC TGATGGCCGC CGGCCTGGGC CTGATCATCG GCGGGGCGTT CGGCAACAAC CTGATCGACC GGATTCGCTA CGGCTATGTC GTCGACTTCA TCGACGTCTC GCGGATGCAC TTCCCGTGGG TGTTCAATGT CGCCGACTCG GCGATCACCG TCGGGGTCTG CCTGCTGCTG CTGGACAGCT TCCTGTCGGA GGAAAAAAAG CTGGGCAATC CCGACGGCCA TGGGCTTTGA
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Protein sequence | MLKITRLGWT AYAIAIATIV LDQISKAWIL VTLGTTQGAS QPVFGPLYLT LVHNQGMSFG LFRGSEVSRW LLTIFSAAVV VGLAIWARKA VKPLMAAGLG LIIGGAFGNN LIDRIRYGYV VDFIDVSRMH FPWVFNVADS AITVGVCLLL LDSFLSEEKK LGNPDGHGL
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