Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4042 |
Symbol | |
ID | 5901504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4378039 |
End bp | 4379298 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641564563 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001685665 |
Protein GI | 167648002 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.18678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGGC TGATGCTGGC GCTGCTGACC GGCGCCTATC TCTGTCTGGC TCTTGTGACC TCCCTGGCCC TGTGGCGCAT GGGAGCGGCT CCGGCCGTCG GCCTGGCCGC CTTCATCGGC GCCATGGGCC TGTGCTTCGC CATCCACGGC GTGATCGCCG GCGTCCTGCA GGGCGCGACC CTGCGCGTCG ATATCGAGAC CATCCGCGAG GCCCACGGCA TCCTGCTGGA ACAGATCGAG AAGGTCGACG CCCGCATCAC CGGCCTGCTG GAGACCGTCG CCGACGACGC CCAGCGCCGC TCGGCCGAAC TGACCAGCGA GGTCCATCAG TTGGAAGACC TGGTCGTGCG CATGAGCGAC CGGCTGGAAA ACCAGCTGAC CCACCATGTC GCCGCCGCCC GCGACGAGCC GCGCGGCCGC TCGTCGCAGT CCAGCGCCTT GCTCGGCGTG GTGCAGGACG CCCTGGCCGA CAACCGGGTC GACCTCTATC TGCAGCCGGT CGTCAGCCTG CCCCAGCGCC GGACCGTCTT CTACGAGAGC TTCTCGCGCC TGCGCGACGA GACCGGCCGG GTGCTGATGC CCGCCGAATA CCTGGCCGTG GCCGAGCCCG AGGGCCTGAC CGCCGCGATC GACAACCTGC TGCTGTTCCG CTGCGTGCAG ATCGTCCGTC GCCTGGCCAA GCAGGACCGC AAGGTCGGGA TTTTCTGCAA CATCTCGCTG GCCAGCCTGG CCGACGAGGC GTTCTTCGCC CAGTTCCTCG AATTCCTGCA GGTCAACAAG GACCTGTCGG GCGCCCTGAT CTTCGAACTG GGCCAGGCCG CCTTCAACGA CCGAGGCCCG GTCGAGGCCC GTCACATGGC CCGCCTGGCC AGCCTGGGTT TCCGCTTCAG CCTTGACAAG GTCACCGACC TGGACCTGGA CTTCCAGGAC CTGGCCCGCG CCGACGTCAA GTTCCTGAAG ATTGGCGCCC AGCTTCTTCT GGACCAGTTG GAAGAGCAGG GCGGCAAGCT GGTCATCGCC TCGTTGCCCG ACCTCAATGC CGAGGACTTC GCCGGCCTGA CCCGTCGCTA CGGCATCGAG GTGATCGCCG AGAAGGTCGA GCACGAGCGC CAGGTGGTCG ACGTGCTGGA GCTCGACATC GGCTACGGCC AGGGCCACCT GTTCGGCGAG CCCCGCGCCA TCCGCGACTC GATCATCGCC GAAGCCGACC CGCCGCAGGA CTTCATGCGC GGCGCGATGC GGCGCGGGAT GGGGCGGTAG
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Protein sequence | MRRLMLALLT GAYLCLALVT SLALWRMGAA PAVGLAAFIG AMGLCFAIHG VIAGVLQGAT LRVDIETIRE AHGILLEQIE KVDARITGLL ETVADDAQRR SAELTSEVHQ LEDLVVRMSD RLENQLTHHV AAARDEPRGR SSQSSALLGV VQDALADNRV DLYLQPVVSL PQRRTVFYES FSRLRDETGR VLMPAEYLAV AEPEGLTAAI DNLLLFRCVQ IVRRLAKQDR KVGIFCNISL ASLADEAFFA QFLEFLQVNK DLSGALIFEL GQAAFNDRGP VEARHMARLA SLGFRFSLDK VTDLDLDFQD LARADVKFLK IGAQLLLDQL EEQGGKLVIA SLPDLNAEDF AGLTRRYGIE VIAEKVEHER QVVDVLELDI GYGQGHLFGE PRAIRDSIIA EADPPQDFMR GAMRRGMGR
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