Gene Caul_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4036 
Symbol 
ID5901498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4373416 
End bp4374294 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID641564557 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001685659 
Protein GI167647996 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.332559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.638974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA TCAAGACGGT CGGCGTGATC GGCGCTGGCC AGATGGGCTC GGGCATCGCC 
CATGTCTGCG CCCTCGGCGG CTATGACGTG CGGCTGCACG ACGTCTCGCG CGAGCGCATC
GACGCCGGCC TGGCCCTGAT CGAGAAGAAC ATGGCCCGCC AGGTCCATCG CGGGATCATC
GACCAGGACG CCATGGACGC CGCCCTGAAG CGGATCACCG CCGCCGAGGA CGTGGCCCAG
ATCGGCGCCA CCGACCTGGC CATCGAGGCG GCGACCGAGA ACGAGGAGAT CAAGAAGTCG
ATCTTCCGCG GTCTCCAGCC CCACCTGGGC CCCAACACCC TGCTGGCCTC GAACACCTCG
TCGATCTCGA TCACGCGGCT GGCCAGCGCG ACGGACCGCC CCGAGCGGTT CATCGGCCTG
CACTTCATGA ACCCGGTCCC GCTGATGAAG CTGGTCGAGA TCATCCGCGG CATCGCCACC
GACGTGCCGA CCTACGAGCG CGCCGTGGCC TTCGCCAAGT CGCTGGGCAA GATCACCAGC
AACGCCGAGG ACTTCCCCGC CTTCATCGTC AACCGCGTGC TGGTGCCGAT GATCAACGAG
GCGATCTACA CCCTGTACGA GGGGGTCGGC ACGGTCGACG CCATCGACAC GGCGATGAAG
CTGGGCGCCA ACCATCCGAT GGGTCCGCTG GAGTTGGGCG ACTTCATCGG CCTGGACACG
GTCTTGAGCA TCATGAACGT GCTGCACGAG GGCCTGGCGG ACAGCAAGTA CCGCCCTTGC
CCGCTGCTGG TGAAGTATGT CGAGGCTGGC TGGTTGGGCA AGAAGGCCGG CCGCGGCTTC
TACGACTACC GCGGCGAGCA CCCGGTCCCG ACGCGGTAG
 
Protein sequence
MTDIKTVGVI GAGQMGSGIA HVCALGGYDV RLHDVSRERI DAGLALIEKN MARQVHRGII 
DQDAMDAALK RITAAEDVAQ IGATDLAIEA ATENEEIKKS IFRGLQPHLG PNTLLASNTS
SISITRLASA TDRPERFIGL HFMNPVPLMK LVEIIRGIAT DVPTYERAVA FAKSLGKITS
NAEDFPAFIV NRVLVPMINE AIYTLYEGVG TVDAIDTAMK LGANHPMGPL ELGDFIGLDT
VLSIMNVLHE GLADSKYRPC PLLVKYVEAG WLGKKAGRGF YDYRGEHPVP TR