| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4011 |
|---|
| Symbol | |
|---|
| ID | 5901473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4342373 |
|---|
| End bp | 4343269 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641564532 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001685634 |
|---|
| Protein GI | 167647971 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0205558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGC TGGATGGACA TGTCGCGATC GTCACGGGGG CGGGCGGGGG ACTGGGCCGC
GCCCATGCGC TCTATCTCGC CAGCCAGGGC GCGCGGGTGG TGGTCAACGA CCTGACCCAG
GACGCGGCCG ACCGCGTGGC CGCCGAGATC ACGGCGCGCG GGGGCCAGGC GATCGGCGTC
GCGGCCTCGG TCACCGACGA GGCGGCGGTC GGCGCGATGG TCCGCCAGGT CATCGACCGC
TGGCGGCGGA TCGACATCCT GGTCAGCAAC GCCGGCATCC TGCGCGACAA GAGCTTCGCC
AAGATGAGCC TGGACGACTT CCGCCTGGTG GTCGACGTCC ACCTGATGGG CGCGGTGGTC
TGCGCCAAGG CGGTGTGGGA CGTCATGCGC GAGCAGCGCT ACGGCCGCAT CGTGATGACG
ACCTCCTCGT CGGGCCTCTA CGGCAATTTC GGCCAGGCCA ACTACGGCGC GGCCAAGATG
GCCCTGGTGG GGCTGATGCA GACCCTGGCC ATCGAGGGCG AGAAGTACGG CGTTCGCGTC
AACTGCCTGG CTCCCACGGC GGCGACCGGC ATGACCGAGG GCGTGTTGTC GCAGGCCAGT
CTCGAACGCC TCGATCCCAC CCTGGTCAGC CCGGGCCTGC TGGCCCTGGT GGTCGAGGGC
GCCCCGACCC GGGCCATCCT GTGCGCCGGC GCCGGCCACT TCGCCACCGC CAACATCACC
TTGACCGAAG GCCGCTATGT CGGCGACGCT CCCGACGCGG GCGAGCAGGT GATCCGCCAA
TGGGAGGCGG TTTCCGAGCG GGCCGGCGAG ATCGTCCCGG CCTACGGTTT CGCCCAGGCC
GAGCGCGAGC TGGCCAGCGC CGGCCTGATC GCCGCCGTCG CCGCGGAGCG GGCGTGA
|
|---|
| Protein sequence | MLLLDGHVAI VTGAGGGLGR AHALYLASQG ARVVVNDLTQ DAADRVAAEI TARGGQAIGV
AASVTDEAAV GAMVRQVIDR WRRIDILVSN AGILRDKSFA KMSLDDFRLV VDVHLMGAVV
CAKAVWDVMR EQRYGRIVMT TSSSGLYGNF GQANYGAAKM ALVGLMQTLA IEGEKYGVRV
NCLAPTAATG MTEGVLSQAS LERLDPTLVS PGLLALVVEG APTRAILCAG AGHFATANIT
LTEGRYVGDA PDAGEQVIRQ WEAVSERAGE IVPAYGFAQA ERELASAGLI AAVAAERA
|
|---|
| |