| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4004 |
|---|
| Symbol | |
|---|
| ID | 5901466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4334536 |
|---|
| End bp | 4335339 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641564525 |
|---|
| Product | gluconate 5-dehydrogenase |
|---|
| Protein accession | YP_001685627 |
|---|
| Protein GI | 167647964 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG CAGCAGAACC AAGGGGCGGG ACGCTGGCGC GCCTGTTCGA TCTCACCGGT
CGGGTGGCGA TCGTCACCGG CGGATCGCGA GGCCTCGGCT TGCAGATCGC CAGCGCTCTG
GGCGAATTCG GCGCGTCGAT CGCTCTGGTG GCGCGCAAGC AGGCCGAGCT CGACGCCGCC
GTCGAGCATC TGGCCGCGGC GGGGATCACG GCGGTTGGCT TCGCCGCCGA CCTTGGCGCG
CTGGACGCGG CTTCGGCCCT GACCGAACGC GTCCTCACGC ATTTCGGCCG GATCGACATC
CTGGTGAACA ATGCGGGCAC GGTCTGGGGT GCGCCCGCCG AGGACTACCC CTTGGAAGGC
TGGAACAAGG TCATCGACCT GAACGTGACC GGTCTTTTCC TGCTGACCCA GGCGGTGGCG
CGCGACGCCT TCCTGAAGCA GGGCAAGGGC GTCGTGGTCA ATGTCGCCTC GATCGAGGGG
CTGCAGGGCC ATCATCCCGA TCAGCTGGGC ACGATCGCCT ACAACACCGC CAAGGGCGCG
GTGGTCAACA TGACCCGCGC GCTGGCCGCC GAATGGGGAC CGCGCAACAT CCGCGTCAAC
GCGCTGGCCC CAGGCTATTT CCCCTCGAAA ATGACGATGG TCACCGTCGC GGCGCACGGC
GACGAGATGC TGCGCCAGAC GCCGCTGGGA AAGCTTGGCG GCGACACCGA CCTGATGGGG
CCGGCCCTGC TGCTGGCCTC CGACGCCGGC GGCCACATCA CGGGGCAGAT CCTGGTGATC
GACGGCGGCG CGACGATCAT CTGA
|
|---|
| Protein sequence | MTDAAEPRGG TLARLFDLTG RVAIVTGGSR GLGLQIASAL GEFGASIALV ARKQAELDAA
VEHLAAAGIT AVGFAADLGA LDAASALTER VLTHFGRIDI LVNNAGTVWG APAEDYPLEG
WNKVIDLNVT GLFLLTQAVA RDAFLKQGKG VVVNVASIEG LQGHHPDQLG TIAYNTAKGA
VVNMTRALAA EWGPRNIRVN ALAPGYFPSK MTMVTVAAHG DEMLRQTPLG KLGGDTDLMG
PALLLASDAG GHITGQILVI DGGATII
|
|---|
| |