Gene Caul_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3981 
Symbol 
ID5901443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4311303 
End bp4312109 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID641564502 
Productalpha/beta hydrolase fold 
Protein accessionYP_001685604 
Protein GI167647941 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03611] pyrimidine utilization protein D 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.260972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCG GGACCGTCGA TGGCCTGTAC CATGAGGTCC ACGGCGGGCC GGCCTCCGAT 
CGCCAGACGG TGATCCTATC GGCCGGCCTG GGCGGTTCCG GGACCTTCTG GGCGCCGCAG
ATGCAAGCGC TGATGAGCCG CTTTCGCGTC GTCCTCTACG ACCATCGCGG CACGGGCCGC
AGCGCGCGCA CCCTGACCGA CCCGCACACG GTGGCCGCGA TGGGCGACGA CATCGTCAAG
CTCATGGACG CCCTGGGCCT GGAGCGCGCC CACGTGGTCG GCCACGCGGC GGGCGGCAAC
GCCGGCCTGG CCCTGGCGCT GAACCATCCA GATCGCCTCG ACAAACTGGT GGTGGTCAAT
GGCTGGTCGC GGCCCGACCC GCACATCAAG CGCTGCTTCG ACACCCGCCT GGCCCTGCTG
AACGACACCG GCATCGCCGC CTATGTCCAC GCCCAGCCGC TGTTTCTCTA TCCGGCCGAC
TGGCTGAGCG CCAACAACGC CCGGCTCGAG GCCGAGGAAG TCCACCATAT CAACGGCTTT
CCCAGCCCGG ACGTGATGCG GACCCGCATC CAGGCCCTGC TGGAGTTCGA TATCGACGAG
GATCTGGAAA CAATCAGATG CCCCGTGCTG GTCAGCGCCA GCGCCGACGA TATGCTGGTG
CCGCTCAGTT GCTCACGCCG CCTGGCCGAG CGCCTGCCCA ACGCCACGCT CGACATCGCG
CCCTGGGGCG GCCACGGCTT CACCGTCACC GCGCCCGAGG CCTTCAACGC GGCGGTCTTG
AACTTTCTGA GCGGGGAAGC GGCGTGA
 
Protein sequence
MQSGTVDGLY HEVHGGPASD RQTVILSAGL GGSGTFWAPQ MQALMSRFRV VLYDHRGTGR 
SARTLTDPHT VAAMGDDIVK LMDALGLERA HVVGHAAGGN AGLALALNHP DRLDKLVVVN
GWSRPDPHIK RCFDTRLALL NDTGIAAYVH AQPLFLYPAD WLSANNARLE AEEVHHINGF
PSPDVMRTRI QALLEFDIDE DLETIRCPVL VSASADDMLV PLSCSRRLAE RLPNATLDIA
PWGGHGFTVT APEAFNAAVL NFLSGEAA