Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3979 |
Symbol | |
ID | 5901441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4310089 |
End bp | 4310790 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641564500 |
Product | isochorismatase hydrolase |
Protein accession | YP_001685602 |
Protein GI | 167647939 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.406396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC CTGACACCCT GATGCTGCCG GCCCGGCCCG AACCGATCGC CCTGCCGGTC GACAAGACCG CGGTGATCGT CATCGACATG CAGAACGCCT ACGCCTCCCC CGGCGGTTAT CTGGACCTGG CCGGCTTCGA CATCAGCGGC GCGGCCGCGG TGATCGACAA GATCAAGGGC GTGCTGGACG TGGCGCGCGG CGCGGGCATG CCGGTGATCT ATTTCCAGAA CGGCTGGGAC AGCGACTATG TCGAGGCCGG CGGCCCCGGC TCGCCCAACT GGCACAAGTC CAACGCCCTG AAGACCATGC GGGCCCGGCC CGAGCTGCAA GGCAAACTGC TGGCGCGCGG CGGCTGGGAC TACGACCTAG TCGACGCCTT GAAGCCCGAA CCCGGCGACA TCCAGCTGCA CAAGACCCGC TACAGCGGCT TCTTCAACAG CCAGCTCGAC AGCGTGCTGC GCTCGCGCGG CATTCGCCAC CTGGTGTTCG TCGGCATCGC CACCAATGTC TGCGTGGAGT CGACCCTGCG CGACGGCTTC TTCCTGGAAT ATTTCGGCAC GGTGCTCGAG GACGCCACCC ACCAGGCGGG TCCGGACTTC GTGCAGAAGG CGGCGCTCTA CAACATCGAG ACCTTCTTCG GGTGGGTGTC GACCACGGCC GACTTCAAGG GAGCCGTGGG GCAGCGGGAA GGCGCTGGCT AG
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Protein sequence | MTTPDTLMLP ARPEPIALPV DKTAVIVIDM QNAYASPGGY LDLAGFDISG AAAVIDKIKG VLDVARGAGM PVIYFQNGWD SDYVEAGGPG SPNWHKSNAL KTMRARPELQ GKLLARGGWD YDLVDALKPE PGDIQLHKTR YSGFFNSQLD SVLRSRGIRH LVFVGIATNV CVESTLRDGF FLEYFGTVLE DATHQAGPDF VQKAALYNIE TFFGWVSTTA DFKGAVGQRE GAG
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