Gene Caul_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3951 
Symbol 
ID5901413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4277860 
End bp4278960 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID641564472 
Productextracellular solute-binding protein 
Protein accessionYP_001685574 
Protein GI167647911 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0469175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA ACCGCATTCT CGGCACACGC CGCTCGCTGC TGACCGCCAT GGGCGCGGCG 
GCCATCGGCA TCAGCTTCAC CGCCTGTGGT CAGAAGCCCA AGGGCGAAGC GACCAAGTCG
CCGAACGGCG AAGAGCCCAA GCTGAACTTC TACAACTGGG ACACCTATAT CGGCGAGACG
ACCCTGGGCG ACTTCAAGAA GGCCACCGGC GTCGACGTCA ACATGAGCCT GTTCGCCACC
AACGACGAGC TGTTCGCCAA GCTGAAGGCG GGCAACGCCG GCTATGACGT GATCGTGCCG
TCCAACGAGT TCGTCACCCG CATGGGCCAG GCGGGGATGC TGGAGCCGCT GGACCACGCC
AAGATCCCCA ACATCAAGAA CATCGACCCG GCCTTCCTCG ACCCCGACTA CGACAAGGGC
CGCAAGTTCT CGATGCCCTA TACCTGGCTG GTGCTGGGCA TCGGCTATCG CAAGTCCAAG
GTCAACGGCG TTCCGGACAG CTGGAAGTAC CTGTTCGACA GCGCGCAATA TAACGGCCGC
ATCGCCCTGC TGTCGGAAAG CGCCGACCTG ATCCGCCTGG CCGCCAAGTA CAAGGGCCAC
AGCGTCAACA ACATCCCGCC CGAGCTGGTC ACCGAGATCG AGAAGATGCT GATCAAGCAG
AAGCCCTATG TGAAGGCGTT CCACGACGAC AATGGCCAGG ACATGCTGGT GGCCGGCGAT
GTGGACCTGG TGCTGGAATA TAACGGCGAC ATCGCCCAGG TGATGAAGGA CGATCCGGAC
ATCGACTTCG TGATCCCCAA GGAAGGGTCG CTGATCAATT CCGACACCCT GTGCATCCCC
AAGGGCGCGC CGCGTCCCGA TAACGCCCAC AAGTTCATCA ACTACCTGCT GGACGCCCAG
GCCGGGGCCG AGATCTCCAA GACCATCCTC TACCCGACCC CGAACGCGGC CGCCAAGGCG
TTGATGCCGC CGGAATATCG CGACAACAAG GTGATCTTCC CGCCGGCCGA CATCATGAGC
AAGTGCGAGT ACGGGGCGTT CGAGGGAGCC GAGAAAGCCA GCCTGTACGA GGAAGTCATC
ACCCGGGTGC GGGCGGCTTA G
 
Protein sequence
MSTNRILGTR RSLLTAMGAA AIGISFTACG QKPKGEATKS PNGEEPKLNF YNWDTYIGET 
TLGDFKKATG VDVNMSLFAT NDELFAKLKA GNAGYDVIVP SNEFVTRMGQ AGMLEPLDHA
KIPNIKNIDP AFLDPDYDKG RKFSMPYTWL VLGIGYRKSK VNGVPDSWKY LFDSAQYNGR
IALLSESADL IRLAAKYKGH SVNNIPPELV TEIEKMLIKQ KPYVKAFHDD NGQDMLVAGD
VDLVLEYNGD IAQVMKDDPD IDFVIPKEGS LINSDTLCIP KGAPRPDNAH KFINYLLDAQ
AGAEISKTIL YPTPNAAAKA LMPPEYRDNK VIFPPADIMS KCEYGAFEGA EKASLYEEVI
TRVRAA