Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3944 |
Symbol | |
ID | 5901406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4270301 |
End bp | 4271701 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641564465 |
Product | glutamate--putrescine ligase |
Protein accession | YP_001685567 |
Protein GI | 167647904 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.244314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.971464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTACA AAGACAAGAA ATCCAAACCC GCCCCGAAGA CCACGCGCGG GGTGGCCTCG CTGGACGAGG CCAAGGACTG GTTCGCCCGG CAGAACATCG AGGAGATCGA GTGCGTCGTG CCCGACCTGG CCGGGGTGCC GCGCGGCAAG ATCATGCCGG TGCGCAAGTT CCTGGGCACG CCGTCGATGA ACCTGCCGCT GGCGGTGTTC TACCAGACCA TCACCGGCGA CTTCCCCGAG TTCGAGGGAG CGGTCAATTC GGTGCAGGCC GACACCGACG TGATCCTGAC CCCGGACCTG GCCACCCTGG CCGTGGTGCC CTGGGCCCAG GACCCGACGG CCCAGGTGAT CCATGACGCC TTTCACCCCG ACGGCCGCCC CGTGGAGGAG AGCCCCCGCC AGGTGCTGCG CCGGGTGGTG GCCCTCTATC GCGAGAAGGG CTGGGACCCG ATCGTCGCGC CGGAGATCGA GTTCTACCTG GTCGAGAAGA ACACCGATCC CGACTATCCG CTGAAGCCGC CCGTGGGCCG CTCGGGCCGG CCCGAGACCG GTCGCCAGGG CTATTCGATC GCGGCGGTCA ACGAATTCGA CGCCCTGTTC GAGGACATGT ACGAATATTC CGAACGCCAG GGCCTGGAGA TCGACACCCT GATCCACGAG AGCGGCGTGG CCCAGATGGA GATCAACCTG CGCCACGGCG CGCCGCTGGA GCTGGCCGAC CAGGTGTTCA TGTTCAAGCG CACCATCCGC GAGGTGGCGC TGGAGCACGA GATCTACGCC ACCTTCATGG CCAAGCCGAT GGCCGCCGAG CCCGGCAGCG CCATGCACAT CCACCAGTCG ATCCTGAACA GCGACGGCGA GAACCTGTTC TCCGATCCCA AGACCGGCGA CGCCACCCCG CTGTTCTACG CCTTCATCGC CGGCCAGCAG CGCTACCTGC CGGCGATCAT GGCGATCCTG GCGCCTTATG TGAACTCCTA CCGCCGGATC GCGCGGGATT CGGGCGCGCC GGTCAACACC CAGTGGGGCT ACGACAATCG CACCTGCGGC CTGCGGGTCC CGCCGTCCGA TCCGGAGAAC CGGCGCCTCG AGAACCGCAT TCCGTCGTCG GACGCCAATC CGTACCTGGC CATCGCCGCG GTGCTGGCCG CCGGCTATCT GGGCATGGTC CACAACCTGA CGCCCACCGC GCCCGTCGAC ACCGACGCCA ACATCCGGGG CATCGAACTG CCGCGCAGCC TGCTGGAGTC GGTGGCCCTG TTCGAGGAGG CCAAGCCGCT GATCGAGATC CTGGGCGGCA CGTTCTGCGC CGCCTACGCC ACGGTGAAAC AGGCCGAGTA CGAGACCTTC ATGCGCACGA TCAGCCCGTG GGAGCGGGAG TTCCTGTTGC TGAATGTGTA G
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Protein sequence | MKYKDKKSKP APKTTRGVAS LDEAKDWFAR QNIEEIECVV PDLAGVPRGK IMPVRKFLGT PSMNLPLAVF YQTITGDFPE FEGAVNSVQA DTDVILTPDL ATLAVVPWAQ DPTAQVIHDA FHPDGRPVEE SPRQVLRRVV ALYREKGWDP IVAPEIEFYL VEKNTDPDYP LKPPVGRSGR PETGRQGYSI AAVNEFDALF EDMYEYSERQ GLEIDTLIHE SGVAQMEINL RHGAPLELAD QVFMFKRTIR EVALEHEIYA TFMAKPMAAE PGSAMHIHQS ILNSDGENLF SDPKTGDATP LFYAFIAGQQ RYLPAIMAIL APYVNSYRRI ARDSGAPVNT QWGYDNRTCG LRVPPSDPEN RRLENRIPSS DANPYLAIAA VLAAGYLGMV HNLTPTAPVD TDANIRGIEL PRSLLESVAL FEEAKPLIEI LGGTFCAAYA TVKQAEYETF MRTISPWERE FLLLNV
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