Gene Caul_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3943 
Symbol 
ID5901405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4268876 
End bp4270162 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content72% 
IMG OID641564464 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001685566 
Protein GI167647903 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.613725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA CCGGCCATCC CGCCGCCTCC TGGTACGCCG CCACGGCCAC GCCCTTCCCG 
GCGCTGCCCG CCCTGGAACA CGACGCCCGC GCCGACGTCT GCATCGTCGG CGCGGGCTAT
ACCGGCTTGG GCGCGGCGCT GGAGCTGGCC CAGCGCGGCG CATCGGTGGT CGTGCTCGAG
GCCGCCCAGG TTGGCAGCGG CGCCAGCGGG CGCAATGGCG GGCAGGTCCA TACCGGCCAG
CGCAACGACC AGGCCTGGCT GGAGAAGACC CTCGGCCGCG ACGACGCGAT GGCCCTCTGG
CGGATGAGCC AGGACGCTCG CGCCCACCTG CTGTCGCTGA TCGCCACGCA CCAGATCGCC
TGCGACTTTG CCCCGGGCAT GGTCCACGCC CGTCACCGGC GGGGCGGGGA GGGCGTGGAC
GCGGCCTATA TCGATCTCAT GCAAAGCCGC TACGGCTACG ACCAACTGGC CCTGATCGAC
GCGGCGGACC TGGCCGACGA GCTGGGAACC GACGTCTATC ACGGCGGCCT GGTCGACCGG
GGCGGCGGCC ACCTGCATCC GCTGAACCTG GCGCTGGGCC TGGCGCGGGC GGCGATGACG
GTCGGGGCGG TGGTCCACGA GCAGACCCGC GCCACGGCCT GGCGGCGCGA GGGCGGGGCG
ATCGTGGTCG AGACCCCGAC CGGACGCGTG ACCTGCGACC AGTTGATCCT GACTGGCGAC
GGCTATCTCG ACGATCTGGT CGGCGGACCG GCGCGGGCCA GGGTCATGCC GATCAACAAC
TTCATCCTGG CCACCGAACC GCTCGGCGAG CGGGCGGACC AGATCATCCG CTCCAACGCC
GCCGTGGCTG ACACCCGCTT CGTGGTCAGC TATTTCCGCA AGAGCCCCGA CGGCCGGCTG
ATCTTCGGCG GCGGCGAAAA CTACCGGCCG GGCTTTCCGC CGGATCTGAA AGCCTTCGTG
CGGCGGCACA TGCTGAAGGT CTATCCAGGC CTGGCCGACG TCGCCGTGAC CCACGCCTGG
GGCGGAACCC TGGGCATCAC CGTCCACCGC GCACCGTTCG TCCGCGACCT GGCCCCGGGG
GTGCGCATCG CCGCCGGCTA TTCGGGGCAG GGCGTGATGC TGGCCCCCTA CTTCGGCAAG
CTGCTGGCCG ACGCGGCCCT GGGCGACGGC GAGGGGGTAA AGCTGCTGTC GAAACTGCCG
ACCCCGCCGT TCCCGGGCGG CCGCCTGCTG CGCTGGCCGC TGACGGTGGC GGGGCTCAGC
TGGTACGCGC TGCGGGATCG GATCTAG
 
Protein sequence
MMNTGHPAAS WYAATATPFP ALPALEHDAR ADVCIVGAGY TGLGAALELA QRGASVVVLE 
AAQVGSGASG RNGGQVHTGQ RNDQAWLEKT LGRDDAMALW RMSQDARAHL LSLIATHQIA
CDFAPGMVHA RHRRGGEGVD AAYIDLMQSR YGYDQLALID AADLADELGT DVYHGGLVDR
GGGHLHPLNL ALGLARAAMT VGAVVHEQTR ATAWRREGGA IVVETPTGRV TCDQLILTGD
GYLDDLVGGP ARARVMPINN FILATEPLGE RADQIIRSNA AVADTRFVVS YFRKSPDGRL
IFGGGENYRP GFPPDLKAFV RRHMLKVYPG LADVAVTHAW GGTLGITVHR APFVRDLAPG
VRIAAGYSGQ GVMLAPYFGK LLADAALGDG EGVKLLSKLP TPPFPGGRLL RWPLTVAGLS
WYALRDRI