| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3941 |
|---|
| Symbol | |
|---|
| ID | 5901403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4264170 |
|---|
| End bp | 4266548 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641564462 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001685564 |
|---|
| Protein GI | 167647901 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.78272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTCGA CAAAGCGTAC CGGGTTTTCC AAGGCCGGAA CGGCGGTCGC GGGACTGCGC
TGGACCACGG CCCTGCTGGC CTCGTCCATG CTGTCCAGCG TGGCGGCCCA CGCCCAGACC
ACCGCGCAGA GCGGCGCCGT CGCCCTCGAG GAAGTGGTCG TGACCGCCCA GAAGCGGTCG
GAAAACCTGC AGGACGTGCC GATCAGCATC CAGGCCCTGG GGACCCAGAC CCTGGAAGAG
CGCCACGTCA GCGGCCTCAA CGACTATGTG AAGTTCCTGC CCAGCGTGTC GATCCAGACC
ACCTCGCCGG GCTTTTCCAG CGTGTTCATG CGCGGCGTGG TCAGCGGCGA CAACGCCAAC
CACTCGGGTC CGCTGCCCAC CGTCGGCACC TATCTGGACG AGCAGCCGAT CACCACGATC
CAAGGCGCGC TCGACGTCCA CATCTACGAC ATCGCCCGGG TCGAGGCGCT GTCGGGGCCG
CAGGGCACGC TGTACGGCGC CAGCTCGATG GCCGGCACGG TGCGCATCAT CACCAACAAG
CCCAGCACCG CGGGCTTCAA GGCCGGCTAC GACATCGAGG CCAACACCGT CTCGAAGGGC
GATCCCGGCT ATGTGGTCGA GGGCTTCGTC AACCAGCCGA TCAACGACAA GGTGGCCGTG
CGCCTAGTCG GCTGGGCCGA GCATGACGGC GGCTATATCG ACAACGTGGC GCAGTCGCGC
ACCTTCCCGA CCTCGGGCGT GACCCGCAAC AACGCCAGCC AGGTCAAGAA GAACTACAAC
GACGTCGACA CCTACGGCGC GCGGGCGGCC CTGCGCCTCG AGCTCGGCGA CAACTGGGTG
ATCACCCCCA CCGTCATGGG CCAGCAAGAG AAGGTGCACG GCCTGTTCGC CTTCGACCCC
ACCCTCGGCG ACCTGAAGGT GGCGCACTAC TATCCCGAAG GCTCCAACGA CAAATGGGGC
CAGGCGGCCC TGACCATCGA GGGCCAGATC AGCAACTTCG ACGTGGTCTA TGCCGGCTCG
TACCTGAAGC GCACTGTCGA CAGCACGTCG GACTACAATG ACTATTCGTT CTTCTACGAC
ACCCTGACCA CCTACGGGCA GTACTATACC GACAACGCCG GCAACCCGGT GGATCCGTCG
CAATACATTC AGGCCCGGGA CGGCTACACC AAGCAGAGCC ACGAGATCCG CATATCGAGC
CCGCAGGAGA ACCGCGTCCG CTTCGTCGGC GGCCTGTTCT ACCAGCAGCA GAAGCACGAC
ATCTTCCAGA ACTACAAGAT CGACGCCCTG GGGACGACCT ATTCGGTGAC GGGCTATCCC
CACACCGTGT GGCTGACCAA GCAGAAGCGC GTCGACGAGG ACCAGGCGGC GTTCGGCGAG
GTGGCGTTCG ACATCACCGA CAAGCTGACC CTGACCGGCG GCGTCCGCTT CTTCAGGGCG
CACAACAGCC TGAAGGGCTT CTTCGGCTTC GGGATCGATT TCCCGTTCAG CTCCGGCGAG
AAGCAGTGCT TCGGCCCGCC GGTCGTCGAC GGTTCGCCCT GTACGAACCT GAACAAGAGC
ATCAAGGAGA ACGGCAACTC GCCCAAGGTC AACCTGACCT ACAAGATCGA CTCCGATAAG
CTGGTCTACG CCACCTATTC CGAGGGCTTC CGGCCGGGCG GCATCAACCG CCGCGGCACG
GTTCCGCCCT ACACCGCCGA CTTCCTCAAG AACTACGAGG CGGGGTGGAA GACCTCCTGG
CTCGAGAACC GGGTGCGCTG GAACGGCGCG GCCTATATCG AGGACTGGAA GGACTTCCAG
GTCGGCCTGC TGGGCGCCAA CAGCCTGACC GAGGTGCACA ACGCGGGCAG CGCGCGGGTC
AAGGGCGTCG AGACCGACAT CAATTGGGCG GTCATGCGAG GTTGGACGGT CTCCGGCTCG
GCCGCCTATA CCAGCGCCCA CCTGACGGAG AACTTCTGCC TGGCGCTGGT CAACGGCCAG
CAGGTCACCA ACTGTCCCAA TCCCGAGGCG CCCAAGGGCT CGGTCCTGCC GATCACTCCG
AAGTTCAAGG CCAACCTGAC CAGCCGCTAC GAATGGGACA TGGGTGAGTA CCGCGCCCAC
GTCCAGGCGG CCGGGGTCTA TCAGACCGGC AGCTGGACCG ACCTGCGGAT CATCGAGCGC
GGGTGGATCG GCCGGCAGAA GGCCTATGGC GTGCTGGACC TGACCACCGG CGTCGATCGC
GACAACTGGA GCCTGGAGCT GTTCGTCAAG AACGCCTTCG ACAAGCGCGC TAGCCTCTAT
CGCTACGCCG AGTGCAACGA GTCGATCTGC GCCGCCCAAG TCTATCAGGT GCCCAACCAG
CCGCGGTTCA TGGGCGTCAA GTTCGGCCAG AAGTTCTAG
|
|---|
| Protein sequence | MVSTKRTGFS KAGTAVAGLR WTTALLASSM LSSVAAHAQT TAQSGAVALE EVVVTAQKRS
ENLQDVPISI QALGTQTLEE RHVSGLNDYV KFLPSVSIQT TSPGFSSVFM RGVVSGDNAN
HSGPLPTVGT YLDEQPITTI QGALDVHIYD IARVEALSGP QGTLYGASSM AGTVRIITNK
PSTAGFKAGY DIEANTVSKG DPGYVVEGFV NQPINDKVAV RLVGWAEHDG GYIDNVAQSR
TFPTSGVTRN NASQVKKNYN DVDTYGARAA LRLELGDNWV ITPTVMGQQE KVHGLFAFDP
TLGDLKVAHY YPEGSNDKWG QAALTIEGQI SNFDVVYAGS YLKRTVDSTS DYNDYSFFYD
TLTTYGQYYT DNAGNPVDPS QYIQARDGYT KQSHEIRISS PQENRVRFVG GLFYQQQKHD
IFQNYKIDAL GTTYSVTGYP HTVWLTKQKR VDEDQAAFGE VAFDITDKLT LTGGVRFFRA
HNSLKGFFGF GIDFPFSSGE KQCFGPPVVD GSPCTNLNKS IKENGNSPKV NLTYKIDSDK
LVYATYSEGF RPGGINRRGT VPPYTADFLK NYEAGWKTSW LENRVRWNGA AYIEDWKDFQ
VGLLGANSLT EVHNAGSARV KGVETDINWA VMRGWTVSGS AAYTSAHLTE NFCLALVNGQ
QVTNCPNPEA PKGSVLPITP KFKANLTSRY EWDMGEYRAH VQAAGVYQTG SWTDLRIIER
GWIGRQKAYG VLDLTTGVDR DNWSLELFVK NAFDKRASLY RYAECNESIC AAQVYQVPNQ
PRFMGVKFGQ KF
|
|---|
| |