Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3934 |
Symbol | |
ID | 5901396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4257557 |
End bp | 4259206 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641564455 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001685557 |
Protein GI | 167647894 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.217875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTA CACAGCAGCG CGACGCGATC ATCATCGGGG GCGGCCACAA CGGCCTAGTC TGCGCCTTCT ACCTGGCCAG CGCCGGATTG AAGGTCACGG TCTGCGAAGC CCGCGACGTG GTCGGCGGCG CCGCCGTCAC CGAGGAGTTC CACCCGGGCT TCCGCAACTC GGTCGCCAGC TACACGGTCA GCCTGCTCAG CCCCAAGGTC ATCGCCGACA TGGACCTGCA CGGCCACGGC CTGCGGATCC TGGAGCGGCC GATCTCCAAC TTCCTGCCGA TCGACAACCA CAGCTACATG AAGCTGGGCG GCGGGCTGGA GCGCACCCAG GCCGAGTTCT GCAAGTTCTC GACCAGGGAC GCCGAGCGCT TGCCGGCCTA CTACGCCATG CTCGACGAGA TTGGCGACGT ACTGCGCGAC CTGGCCGGCG AGACCCCGCC CAATCTCGGC GACGGCCTGC CGGGCCTGCT GCGGGCCCTG CGCCAGGGCG GACGGATGGC CGGCCTTTCC CGCGAGCGCA AGCGCGACCT GCTGGACCTG TTCACCAAGA GCGCCCGCGA CTTTCTCGAT GGCTGGTTCG AGAGCGACGC GGTCAAGGCC AGCTTCGGCT TCGACGCCGT GGTCGGCAAC TTCGCCAGCC CCGACAGCCC CGGTTCGGCC TACGTCCTGC TGCACCACAC CTTCGGCGAG GTGAACGGCA AGAAGGGCGC CTGGGGCCAT GCGGTCGGCG GCATGGGCTC GATCACCCAG GCCATGGCCA AGGCCTGCCG CGCCAAGGGC GTGGAGATCC TGCTCAAGGC ACCGGTCGAG GCGATCCATG TGGAGGATAC CGCGAAAGGC GGCGGCAAGC GCGCCGTGGG CGTGCAACTG GTCGACGGCC GCCAGATCAT GGCCCCGATC GTCAGCTCCA ACCTCAACCC CGCCCTGCTG TACGGCAAGC TGGTCGCCCC CTCGGCCCTG CCCGCCCCAT TCCGCAAGGC GATCAAGGGC TACAAGAACG GCTCGGGCAC CTTCCGGATG AACGTGGCCC TGTCGGAGCT GCCGGACTTC ACCTGCCTGC CCGGCAAGGC CGCGGCCGAG CACCACCAGT GCGGGATCGT GCTGTCGCCG ACCCTGGACT ACATGGACGA GGCCTATCGC GACGCCAAGG CGACCGGTAT TTCCAAGAAA CCCATCGTCG AGATCCTGAT CCCCTCGACC CTGGACGACA GCCTAGCCCC GCCTGGCCAG CACGTGGCCA GCCTGTTCTG CCAGCAGTTC GCCTGGGACC TGCCCGACGG CCGCTCCTGG GACGACGAGC GCGAGGCCGC CGCCGACCTG ATCATCGACA CGGTCAACCA GTGGGCGCCC AACTTCAAGG CGTCGGTCCT GGGGCGGATG ATCCTGTCGC CCGTGGATCT GGAGCGGAAG TTCGGCCTGG TCAACGGCGA CATCATGCAC GGTCACATGT CGCTGGACCA GCTGTGGGCG GCCCGCCCGG TGCTGGGCCA CGCCAGCCAC CGGGCGCCGA TCAAGGGGCT CTACATGTGC GGCGCGGGCT GCCATCCGGG CGGCGGGGTC TCGGGCAATC CGGGGCGGAA CGCGGCCCGC GAGATCCTGA GGGATCGGGA TTTCGCCACG GCGGTGAAGC TGAGCGTGGT GGGGCGGTGA
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Protein sequence | MAATQQRDAI IIGGGHNGLV CAFYLASAGL KVTVCEARDV VGGAAVTEEF HPGFRNSVAS YTVSLLSPKV IADMDLHGHG LRILERPISN FLPIDNHSYM KLGGGLERTQ AEFCKFSTRD AERLPAYYAM LDEIGDVLRD LAGETPPNLG DGLPGLLRAL RQGGRMAGLS RERKRDLLDL FTKSARDFLD GWFESDAVKA SFGFDAVVGN FASPDSPGSA YVLLHHTFGE VNGKKGAWGH AVGGMGSITQ AMAKACRAKG VEILLKAPVE AIHVEDTAKG GGKRAVGVQL VDGRQIMAPI VSSNLNPALL YGKLVAPSAL PAPFRKAIKG YKNGSGTFRM NVALSELPDF TCLPGKAAAE HHQCGIVLSP TLDYMDEAYR DAKATGISKK PIVEILIPST LDDSLAPPGQ HVASLFCQQF AWDLPDGRSW DDEREAAADL IIDTVNQWAP NFKASVLGRM ILSPVDLERK FGLVNGDIMH GHMSLDQLWA ARPVLGHASH RAPIKGLYMC GAGCHPGGGV SGNPGRNAAR EILRDRDFAT AVKLSVVGR
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