Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3921 |
Symbol | |
ID | 5901383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4237332 |
End bp | 4239470 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641564442 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001685544 |
Protein GI | 167647881 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0187238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGACT GGACGCTTCC GCCCTACCGG TTCGACGACA AGGCGACGGG TTCGGCGCCC GCGCGCCCGC CGGAATTTGG GTCCGCGCCG CCGCCGCCTC CCCCCGAGCC GCCCCGCAAG CCCGAGCCGG AAGAGCCCTT CCGAGCGGAT TTGAAGCACG CCAGGGCCAG GCGCGGCCGC TGGATCTGGT GGACCCTGGC CGTCGTCGTG CTGCTGGGCT TGGCGACCGC CGCCTCGGGC GCCGGCTATG TCTGGTGGAA ATACCTGCGC GACACCCCCG CCCTGCCCTC GCGCGAGGCG CTGTTCGCGG TCAACCGCGC GCCGGGCGTT CGTTTCGAGG ACCGCAACGG CCAGGTGATC GCCAGTCGCG GCCCGCGCTA CGGCCAGCGC ATCACCCTGG GCGCCGTGCC CAACTATCTG CCCCTGGCCT TCCTGGCCGC CGAGGACAAG CGGTTCTACA AGCACGGGGC CATCGACCCC TACGGCATCG CCCGCGCGGC CTGGGTCAAC CACCGCGCCC GCCGCACCGT GCAGGGCGCC TCGACCCTGA GCCAGCAATT GGCCAAAGGG CTGTTCCTGA CCCCCGACCG CACGGTCAAG CGCAAGCTGC AGGAAATGCT GATGGCCCAC CGGCTGGAGC AGATCCTCAG CAAGGACGAG GTGCTGGAGC TCTATCTCAA CCGGGTGTTC TTCGGGGCCA ACACCTTCGG CGTGGACGGG GCCAGCCGCA CCTATTTCGG CAAGCCGGCC AGCCAGCTGA CCCTGTCGGA GGCGGCCCTG CTGGCCAGCT TGCCCAAGGC CCCCTCGCGC CTAGCCCTGA CCCGCGATAT GTCCAGCGCC CTGGCCCGCT CGCGCCTGGT GCTGGCCAAC ATGCGCAAGG AGGGCTGGAT CACCGCCGAG CAGGAGAGCC GCGCCCTGGA CGACACGCCA AGGCTCTCCC CCATGGCTGT AGCCGACGAG GGCGACTACG GCTGGGTGCT CGACTACGCC ACCGCCGAGG CCGTGCGCAT CGCCGGCCAG AACGCCCCCG ACCTGGTGGT GCGCCTGACC ATCGATCCGC GCCTGCAGCA TGTGGGGGTC CAGACCGTGC GCCAGGCCAT CGCCATCGGC GGCGAGCACG CCGGCGCCCG CCAGGCGGCC CTGCTGTCGC TGTCGGCCGA CGGGGCGGTG CGGGCCATGG TCGGCGGGAC CGACTATATC GAGAGCCCGT TCAACCGCGC CGTCCAGGCT CGCCGCCAGC CGGGCTCGAC CTTCAAGCCG TTCGTCTACG CCGCCGCCCT GGAAAAGGGC GTGCTGCCCA CCGACATCCG CGTCGACGGG CCGGTGCGGT TCGGCGACTG GAAGCCGGAG AACTACGGCG GCGGCTATCG CGGGCCGATG ACCGTGCAGG ACGCTCTGGT CAATTCGGTC AACACCATCG CCGTCAAGCT GGCCCAGGAG GCCGGCGGTC CGGCGATCGG CGACCTGGTC CGCCGCTTCG GGATCACGAC CCTGCCCTCC AATCCCGACC TGTCGGTGGC GCTGGGGGCC TATGAGGTGA ACCTGCTGCA GCTGACCTCG GGCTTCCAGG TGTTCCAGCA GGGCGGGATC CGCATCGAGC CCTATGTCAT CGAGAGCATC AGCACCCAGG ACGGTCGTCC GATCTTCGCC CACACCGTCC CGCCCACGCC GGTCAGCGTC TACGACGTCG GCAAGGCCAG CATGATGGTC AAGATGATGA AGCGGGTGGT CGAGGTCGGC ACCGCCCGAC GCGCGGCGTT CGGCCGGCCG GCGGCCGGCA AGACCGGCAC CAGCCAGAAC TGGCGCGACG CCTGGTTCGT GGGCTTCACC CCCGACTACG TGACCGGGGT CTGGGTCGGC AACGACGACG ACAAGCCGAT GAACCAGGTG GTCGGCGGCG ACATTCCGGC CAGCATCTGG CGGCGCTACA TGCTGGCGGC CCACGAGGGC CTGGCGGTCC GGGACTTCCC CTGGCTGCTG GCCGACCCCG CGCCCCTGTC CACGCCCGAT CCCCGCAACG GCTTCTACGA AACCCTGTCG GCGGAGTTCG CCCGCGCGGC CTCGGAGCTG GAGCCGGTCG TCGCGCCGGA CGGGGTCCCG GCCGCCGAAC CCCCGGCGCT GGATCAGTTG CCCTACTAG
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Protein sequence | MNDWTLPPYR FDDKATGSAP ARPPEFGSAP PPPPPEPPRK PEPEEPFRAD LKHARARRGR WIWWTLAVVV LLGLATAASG AGYVWWKYLR DTPALPSREA LFAVNRAPGV RFEDRNGQVI ASRGPRYGQR ITLGAVPNYL PLAFLAAEDK RFYKHGAIDP YGIARAAWVN HRARRTVQGA STLSQQLAKG LFLTPDRTVK RKLQEMLMAH RLEQILSKDE VLELYLNRVF FGANTFGVDG ASRTYFGKPA SQLTLSEAAL LASLPKAPSR LALTRDMSSA LARSRLVLAN MRKEGWITAE QESRALDDTP RLSPMAVADE GDYGWVLDYA TAEAVRIAGQ NAPDLVVRLT IDPRLQHVGV QTVRQAIAIG GEHAGARQAA LLSLSADGAV RAMVGGTDYI ESPFNRAVQA RRQPGSTFKP FVYAAALEKG VLPTDIRVDG PVRFGDWKPE NYGGGYRGPM TVQDALVNSV NTIAVKLAQE AGGPAIGDLV RRFGITTLPS NPDLSVALGA YEVNLLQLTS GFQVFQQGGI RIEPYVIESI STQDGRPIFA HTVPPTPVSV YDVGKASMMV KMMKRVVEVG TARRAAFGRP AAGKTGTSQN WRDAWFVGFT PDYVTGVWVG NDDDKPMNQV VGGDIPASIW RRYMLAAHEG LAVRDFPWLL ADPAPLSTPD PRNGFYETLS AEFARAASEL EPVVAPDGVP AAEPPALDQL PY
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