| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3872 |
|---|
| Symbol | |
|---|
| ID | 5901334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4191553 |
|---|
| End bp | 4192965 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641564394 |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001685496 |
|---|
| Protein GI | 167647833 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC ATGCCGAGCC GATCACCACG ATCCCGCGCC AGGACGCGGT CCCGACCGCT
CGCCCGTCCG CCGGGCTAAT CGCCAAGTAT GACGGCCGCG CGCCGCGCTA CACGAGCTAT
CCGCCGGCCA CTCAGTTCAC CGCCGAGGTC ACCGCCGAAA CCTATGGCGC ATGGCTGGGG
GCGCTGCCGA CCGACCAGGC CGTATCGCTC TATCTGCACA TCCCGTTCTG CGCCCGGCTC
TGCTGGTACT GCGGCTGCAA CACGCGGGCG GTGAACCGTC ACGAACCGGT CGGCGACTAT
GTGCGCCTGC TGCTGGACGA GATCGACCTG CTGGGCGCCG CCCTGCCCGC TCGCCTGACC
GCCGGCACCG TGCATTTCGG CGGCGGCACG CCCAACATGC TGTCGACGGA CGAGGTCGAT
GCGATCTTCG ACCGTCTGGG CAAGGTCTTC GACCTCGCTT CGGATATCGA CATCGCCATC
GAGATGGATC CGGCTGTGCT GACCCGCGAC TGGGTGCGCG CCGCGGGCGC CCGGGGCCTG
AGCCGCGCCA GCCTGGGAGT CCAGAACCTG ACGCCGGAGG TTCAGGCGGC GGTCAATCGC
CGCGACACCT TCGACCAAAT CGCCGACTGC GTCGCCTGGC TGCGCGAAGC CAAGGTCGCG
TCGATCAACC TCGACCTGAT GTACGGCCTG CCGCACCAGA CCACGGCCAA CACGCTCTCG
ACCCTGGATG AGCTCCTGAC CCTGCGCCCT GAGCGCCTGG CCCTGTTCGG CTACGCCCAT
GTGCCGTGGA TGAAGAGCCA CCAGCAGCTG ATCGACGAGG CGGCTCTGCC CGGACCCCAG
GCGCGCCTCG ACCAGAGCGA AAGCGCCGCC GAGCGATTGG CGGCCGAGGG CTATGTCCGC
ATCGGCCTCG ATCACTTCGC CTTGCCCGAG GATCCGATGG CCAAGGCCCT GGCGGCTGGA
ACCCTGCGCC GCAACTTCCA GGGCTACACC ACCGATCCGG CCGTCACCCT CCTGGGCATG
GGCGCCTCGG CGATCGGCGG CCTGCCGCAG GGCTTCGTCC AGAACGCCGC CCATGAGCTG
ACCTGGCGCG CGGCGGTCAA GGAGGGGCGC CTGCCGGTGG CGCGCGGCGT CGCGATCAGC
GACGAGGACC GTTTCCGGGC CGAGATCATC GAGCGGCTGA TGTGTGATTT CGCGGTCGAC
TTGGCGGCGG TCTGCGCGCG GCATCGACGG TCGCCCGCCG ACCTGGCCGG CGAGTTGGCG
CGGCTGGCGC CATTCGTGGC CGACGGCCTG GTTCGGGTCG ACGGCTTCAA CATCCAGGTC
CCGCCCGTGG GCCGGCTGCT GGTGCGGTCG ATCGCGGCGG TGTTCGACGC CTATTTCAAC
GCCGACAGCC AACGCCACGC CAAGGCGATC TGA
|
|---|
| Protein sequence | MFEHAEPITT IPRQDAVPTA RPSAGLIAKY DGRAPRYTSY PPATQFTAEV TAETYGAWLG
ALPTDQAVSL YLHIPFCARL CWYCGCNTRA VNRHEPVGDY VRLLLDEIDL LGAALPARLT
AGTVHFGGGT PNMLSTDEVD AIFDRLGKVF DLASDIDIAI EMDPAVLTRD WVRAAGARGL
SRASLGVQNL TPEVQAAVNR RDTFDQIADC VAWLREAKVA SINLDLMYGL PHQTTANTLS
TLDELLTLRP ERLALFGYAH VPWMKSHQQL IDEAALPGPQ ARLDQSESAA ERLAAEGYVR
IGLDHFALPE DPMAKALAAG TLRRNFQGYT TDPAVTLLGM GASAIGGLPQ GFVQNAAHEL
TWRAAVKEGR LPVARGVAIS DEDRFRAEII ERLMCDFAVD LAAVCARHRR SPADLAGELA
RLAPFVADGL VRVDGFNIQV PPVGRLLVRS IAAVFDAYFN ADSQRHAKAI
|
|---|
| |