| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3836 |
|---|
| Symbol | |
|---|
| ID | 5901298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 4155362 |
|---|
| End bp | 4156597 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641564358 |
|---|
| Product | conjugation TrbI family protein |
|---|
| Protein accession | YP_001685460 |
|---|
| Protein GI | 167647797 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA TCAATCCCCG GAAAGAGGGT GATGAAGTTG AAGAGGCCCA GCCGTTAACC
GGCGAGCCGG TCGGACCCGG CCCGATGCGC TTGCGCACCG AAGCGCCGCG CGTAACGCGG
CTGTCGCGCC GTGTGCTCGC GGGGCTAGGC TTGGTCGCCA GCGTCGGCAT CGGCGGCGCG
CTGATCTACG CGCTTCAGAC CCGTGACAGC GGCAAGCCGG CCGAGGAGCT GTACTCGACG
CAGAACCGCA CCACGGCGGA CGGGCTCTCA GGTCTGCCCC GCGACTATAC CGGGCCGGTT
CTTGGGCCTC CGCTGCCCGG CGATCTTGGC CGGCCGATCC TCGACGCGCA GAAGCGCGGC
CAGCCTGTGC CGGTCCCTGG CGCTGGCCCG GTTACCCCTG GCCTAACCGC CGAGGAACAG
CGCCGCCTTC AGGAGATCGA GACCGCACGG ACCAGTCGGC TGTTCTCAGC GACGGAAACG
CGATCAGCCG CCGCATCAAC CTCTACGACC ACACCGTTGG GGGCCGATTC CTCTATGCCG
CCGCAGAACC TCGCCAGCCT CGGGCTTGCG CCTCAGCCGG CGACACCATC GGCGCAGGAT
CGACAACGCG CCTTCCTCAA TGCCGCTCCC GATCGCCGGA CGGTCTCGTC CGACCGCGTT
GCCGCGCCGG CATCGCCCAA CATCCTGCAG GCTGGAGCTG TCATCTCCGC CGCGCTCATA
ACCGGCATCC GCTCCGATCT GCCAGGGCAG ATCACCGCCC AGGTGACGGA GAACATTTAC
GACAGCCCGA CCGGGCGCGT CCTGCTCGTA CCGCAGGGCA CGCGCCTGAT CGGCCAATAC
GACAATGGCA TCGGCTTCGG GCAACGCCGT ATTCTGCTCG TTTGGAACCG CCTTATCCTG
CCGAACGGGC GCTCTATCGT GCTGGAGCGT CAACCTGGCG CGGATGCCGA GGGCTACGCC
GGGCTTGAGG ACGGCGTCGA CTATCACTGG TGGGATCTCG CCAAGGCCGC TGCGCTTTCG
ACCTTGCTCG GCGTCGGTGC CGAACTCGCG ACCGACAACA ACGACCGGCT CGTGCAGGCC
ATTCGCGACG GCGGCCAGGA CACCATTAAC GACGCCGGCC AGCAGATCGT CAGGCGTCAG
CTCAATATCG CGCCCACGCT CACGATCAGG CCGGGCTTCC CGGTGCGGGT GATCGTCACT
CGCGATATTG TACTCGAACC ATATGGAGGA TCTTGA
|
|---|
| Protein sequence | MSDINPRKEG DEVEEAQPLT GEPVGPGPMR LRTEAPRVTR LSRRVLAGLG LVASVGIGGA
LIYALQTRDS GKPAEELYST QNRTTADGLS GLPRDYTGPV LGPPLPGDLG RPILDAQKRG
QPVPVPGAGP VTPGLTAEEQ RRLQEIETAR TSRLFSATET RSAAASTSTT TPLGADSSMP
PQNLASLGLA PQPATPSAQD RQRAFLNAAP DRRTVSSDRV AAPASPNILQ AGAVISAALI
TGIRSDLPGQ ITAQVTENIY DSPTGRVLLV PQGTRLIGQY DNGIGFGQRR ILLVWNRLIL
PNGRSIVLER QPGADAEGYA GLEDGVDYHW WDLAKAAALS TLLGVGAELA TDNNDRLVQA
IRDGGQDTIN DAGQQIVRRQ LNIAPTLTIR PGFPVRVIVT RDIVLEPYGG S
|
|---|
| |