Gene Caul_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3835 
Symbol 
ID5901297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4154340 
End bp4155365 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID641564357 
ProductP-type conjugative transfer protein TrbG 
Protein accessionYP_001685459 
Protein GI167647796 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02775] P-type conjugative transfer protein TrbG 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.805097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT ATTTCCGTAA AGCCGGAGAC CCGGCTTTCC GTACATCCAC ATTCGCGGCT 
TTGCTGCTTT GCACATCGGC GCTGGCAGGC TGCGCCACCA CGCAGAAGCC GCCGGAGATC
GCGTATGACG ATGCGGCCCC GGCCGTGCAG ACCGTCGATC CGCCTGCACC TGTCACCGTG
GTTGAGCTCC CCCGGCCGCT GCCACTGCCC GGCCAGATGA AGCCGGTAGA ACCGTCGCGC
CGCACGCCGG AGGCCGCCGA TCCCACCGCC CGCGTCAACC AGGCCAATGC CGCTGCCCGC
ATCCAGCCGG TGCGCGATGG CTTCATCAAT TCGATGCAGG TCTATCCCTT CACCCAAGGC
GCGCTCTATC AAGTCTACAC CGCCGTTGGG CAGATTACCG ACATCGCGCT GCAGCCCGGC
GAGCAGCTCG TGGGCTCCGG CCCCGTCGCC GCCGGCGACA CCGTGCGCTG GATCATCGGC
GACACCCAGA GCGGATCGGG CGCGACGCTG CAGGTCCATA TTCTGGTGAA GCCTATCCGC
GCCGAGCTGA TGACCAACCT CGTCATCAAC ACCAATCTGC GCACCTATTA TATGGAGCTG
CGCTCGACCG AGCGGACCTA CATGGCGTCG GTGTCCTGGC AGTATCCGCA AGACCAGCTC
ATCGCCTTGC GTCGTCAGAA CGCGCAGGCC GAAGCGACGC AGCCGGTCGC GAGCGGCGTC
GATCTCGCCA ACGTCAACTT CCGCTACGCG ATCGATGGCG ACCGCGCCCC ATGGCGGCCG
CTCCGCGCCT TCGACGACGG CCGTCAGGTC TTCATCGAGT TTCCGCGCGG CATCGCGCAA
GGGGAAATGC CGCCGCTCTT CGTCGTCGGA CCGGAGGGCA ATACCTCCGA ACTGGTGAAC
TACCGCGTGC GCGGCAATCA TATGATCGTC GACCGCCTGT TTGCCGCCGC CGAGCTGCGC
TTCGGCTCGG GCGACAACCA GAAGCGCGTC CGCATCACCC GCACCGACGG GAGGCCTGCG
TCGTGA
 
Protein sequence
MKPYFRKAGD PAFRTSTFAA LLLCTSALAG CATTQKPPEI AYDDAAPAVQ TVDPPAPVTV 
VELPRPLPLP GQMKPVEPSR RTPEAADPTA RVNQANAAAR IQPVRDGFIN SMQVYPFTQG
ALYQVYTAVG QITDIALQPG EQLVGSGPVA AGDTVRWIIG DTQSGSGATL QVHILVKPIR
AELMTNLVIN TNLRTYYMEL RSTERTYMAS VSWQYPQDQL IALRRQNAQA EATQPVASGV
DLANVNFRYA IDGDRAPWRP LRAFDDGRQV FIEFPRGIAQ GEMPPLFVVG PEGNTSELVN
YRVRGNHMIV DRLFAAAELR FGSGDNQKRV RITRTDGRPA S