Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3833 |
Symbol | |
ID | 5901295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 4152296 |
End bp | 4153660 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641564355 |
Product | conjugal transfer protein TrbL |
Protein accession | YP_001685457 |
Protein GI | 167647794 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00915506 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGCA CCGGCGTCAT CGACCACTTC CTGGAGGTCT TCACCCGCTA CATCGATTCA GGCTTCGGCC TGCTCGGTGG CGAGGTCGCC TTCATCGCCA CGACACTGAT CGTCATCGAC GTGACGCTCG CAGCCCTGTT CTGGAGCTGG GGCGCCGATG ACGACATCAT CGCGCGCCTG GTGAAGAAGA CGCTGTTCAT CGGCGTGTTC GCCTACATCA TCGGCAACTG GAATAACCTT GCCCGGATCA TCTTCGAGAG CTTCGCCGGC CTCGGCCTGA AGGCGTCGGG CACCGGCTTC ACGACCGCCG ATCTCCTGCG TCCCGGCAAG GTGGCGCAAA CTGGTCTCGA CGCCGGCAGG CCGCTGCTCG AATCCATCTC CGGCATGATG GGCTACTGGT CGTTCTTCGA GAACTTCATC CAGATCGCCT GCATGTTCTT CGCCTGGGCG CTGGTGCTGC TGGCCTTCTT CGTTCTCGCC GTACAGCTCT TCGTCACTTT GATCGAGTTC AAGCTGACGA CGCTCGCAGG TTTCGTGCTG ATCCCCTTCG GCCTATTCGG CAAATCCGCC TTCATGGCCG AACGTGTGCT CGGCAACGTC ATCTCGTCGG GCATCAAGGT GTTGGTGCTC GCCGTCATCA TCGGCATCGG CTCGACGCTC TTTTCCGAAT TCACCGCCGG CTTCGGCAGC GCGACGCCAT CGATCGATGA CGCGATGGCC ATCGTGCTCG CGGCCCTGTC GCTCCTCGGT CTCGGCATTT TCGGACCGGG CATCGCCAAC GGCCTCGTCT CCGGCGGACC GCAACTCGGA GCCGGCGCCG CTATCGGCAC CGGCCTTGCT GCCGGCGGCA TGGTCGCCGC GGGCGCTGCC GCCGTTGGCG CTGTCGCATC TGGCGGCGCG GCCCTGGCCG GCGGCGCCGC AGCAGCCGCA CGTGGCGGCG CTGCGATGGC GGGCGGAGCA TCGACCGCTT ATAGCCTTGG GTCCGCTGGT CAATCAGGCG CCGCAGGCGT CGCCTCGGGT CTTGGTCGCG TAGCCGAGGC CGGCGCCAGC GCCGCAACGT CGCCGCTGCG CCGCGCCGCA TCCCGCGCCG CCGACAGCAT GAAGTCCAGC TTCTCCGAGG GCGCCAAGTC GACCTTCGAG GCGACGGGCG GCTCCTCGAC CATGGGCACG ATCGGCGGGG GTCCGCAGGA GGCTGAAGGC GCTGGCGCAT CTCCCGCCGC CCAAAGTGGT CCGCCCGCCT GGGCCAAGCG CATGAAACGC TCCCAGGGCA TGACACACGC CGTTCAGGCG ACCGCGCACG CCGTCCGCTC CGGCGACAGC CATGGCGGCG GCTCTTCCGT CAACCTTTCC GAAAGCGACC GCTGA
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Protein sequence | MGGTGVIDHF LEVFTRYIDS GFGLLGGEVA FIATTLIVID VTLAALFWSW GADDDIIARL VKKTLFIGVF AYIIGNWNNL ARIIFESFAG LGLKASGTGF TTADLLRPGK VAQTGLDAGR PLLESISGMM GYWSFFENFI QIACMFFAWA LVLLAFFVLA VQLFVTLIEF KLTTLAGFVL IPFGLFGKSA FMAERVLGNV ISSGIKVLVL AVIIGIGSTL FSEFTAGFGS ATPSIDDAMA IVLAALSLLG LGIFGPGIAN GLVSGGPQLG AGAAIGTGLA AGGMVAAGAA AVGAVASGGA ALAGGAAAAA RGGAAMAGGA STAYSLGSAG QSGAAGVASG LGRVAEAGAS AATSPLRRAA SRAADSMKSS FSEGAKSTFE ATGGSSTMGT IGGGPQEAEG AGASPAAQSG PPAWAKRMKR SQGMTHAVQA TAHAVRSGDS HGGGSSVNLS ESDR
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