Gene Caul_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3833 
Symbol 
ID5901295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4152296 
End bp4153660 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID641564355 
Productconjugal transfer protein TrbL 
Protein accessionYP_001685457 
Protein GI167647794 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00915506 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCA CCGGCGTCAT CGACCACTTC CTGGAGGTCT TCACCCGCTA CATCGATTCA 
GGCTTCGGCC TGCTCGGTGG CGAGGTCGCC TTCATCGCCA CGACACTGAT CGTCATCGAC
GTGACGCTCG CAGCCCTGTT CTGGAGCTGG GGCGCCGATG ACGACATCAT CGCGCGCCTG
GTGAAGAAGA CGCTGTTCAT CGGCGTGTTC GCCTACATCA TCGGCAACTG GAATAACCTT
GCCCGGATCA TCTTCGAGAG CTTCGCCGGC CTCGGCCTGA AGGCGTCGGG CACCGGCTTC
ACGACCGCCG ATCTCCTGCG TCCCGGCAAG GTGGCGCAAA CTGGTCTCGA CGCCGGCAGG
CCGCTGCTCG AATCCATCTC CGGCATGATG GGCTACTGGT CGTTCTTCGA GAACTTCATC
CAGATCGCCT GCATGTTCTT CGCCTGGGCG CTGGTGCTGC TGGCCTTCTT CGTTCTCGCC
GTACAGCTCT TCGTCACTTT GATCGAGTTC AAGCTGACGA CGCTCGCAGG TTTCGTGCTG
ATCCCCTTCG GCCTATTCGG CAAATCCGCC TTCATGGCCG AACGTGTGCT CGGCAACGTC
ATCTCGTCGG GCATCAAGGT GTTGGTGCTC GCCGTCATCA TCGGCATCGG CTCGACGCTC
TTTTCCGAAT TCACCGCCGG CTTCGGCAGC GCGACGCCAT CGATCGATGA CGCGATGGCC
ATCGTGCTCG CGGCCCTGTC GCTCCTCGGT CTCGGCATTT TCGGACCGGG CATCGCCAAC
GGCCTCGTCT CCGGCGGACC GCAACTCGGA GCCGGCGCCG CTATCGGCAC CGGCCTTGCT
GCCGGCGGCA TGGTCGCCGC GGGCGCTGCC GCCGTTGGCG CTGTCGCATC TGGCGGCGCG
GCCCTGGCCG GCGGCGCCGC AGCAGCCGCA CGTGGCGGCG CTGCGATGGC GGGCGGAGCA
TCGACCGCTT ATAGCCTTGG GTCCGCTGGT CAATCAGGCG CCGCAGGCGT CGCCTCGGGT
CTTGGTCGCG TAGCCGAGGC CGGCGCCAGC GCCGCAACGT CGCCGCTGCG CCGCGCCGCA
TCCCGCGCCG CCGACAGCAT GAAGTCCAGC TTCTCCGAGG GCGCCAAGTC GACCTTCGAG
GCGACGGGCG GCTCCTCGAC CATGGGCACG ATCGGCGGGG GTCCGCAGGA GGCTGAAGGC
GCTGGCGCAT CTCCCGCCGC CCAAAGTGGT CCGCCCGCCT GGGCCAAGCG CATGAAACGC
TCCCAGGGCA TGACACACGC CGTTCAGGCG ACCGCGCACG CCGTCCGCTC CGGCGACAGC
CATGGCGGCG GCTCTTCCGT CAACCTTTCC GAAAGCGACC GCTGA
 
Protein sequence
MGGTGVIDHF LEVFTRYIDS GFGLLGGEVA FIATTLIVID VTLAALFWSW GADDDIIARL 
VKKTLFIGVF AYIIGNWNNL ARIIFESFAG LGLKASGTGF TTADLLRPGK VAQTGLDAGR
PLLESISGMM GYWSFFENFI QIACMFFAWA LVLLAFFVLA VQLFVTLIEF KLTTLAGFVL
IPFGLFGKSA FMAERVLGNV ISSGIKVLVL AVIIGIGSTL FSEFTAGFGS ATPSIDDAMA
IVLAALSLLG LGIFGPGIAN GLVSGGPQLG AGAAIGTGLA AGGMVAAGAA AVGAVASGGA
ALAGGAAAAA RGGAAMAGGA STAYSLGSAG QSGAAGVASG LGRVAEAGAS AATSPLRRAA
SRAADSMKSS FSEGAKSTFE ATGGSSTMGT IGGGPQEAEG AGASPAAQSG PPAWAKRMKR
SQGMTHAVQA TAHAVRSGDS HGGGSSVNLS ESDR