Gene Caul_3827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3827 
Symbol 
ID5901289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4147079 
End bp4148044 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID641564349 
ProductP-type conjugative transfer ATPase TrbB 
Protein accessionYP_001685451 
Protein GI167647788 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID[TIGR02782] P-type conjugative transfer ATPase TrbB 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCA CAGCTCTTGG CCCCGCCATC GCCGAATTTC TGGACGACCC GTCCGTCGTC 
GAGGTGATGC TCAACCCCGA TGGGCGTCTC TGGATCGACT GCCTTTCCGA AGGTCTGTCT
GACACCGGCG AACGACTGTC GCCCGCCGAT GGCGAACGGA TCATCCGCCT CGTCGCCCAT
CATGTCGGCG CCGAAGTTCA TTCCGGCGCG CCGCGCGTCT CCGCGGAGCT GCCCGAGACG
GGGGAGCGGT TCGAGGGGCT TCTGCCTCCT GTGGTGGCGG CCCCGGCCTT CGCGATCCGC
AAGCCCGCCG TCGCCGTGTT CACGCTCAGC GATTACGTGG CCGCCGGCAT CATGGTGGCC
TCACAAGCCG AGGTGCTGCG GCAGGCCGTC GCCGAGCGTC GCAACATCCT CGTCGCGGGT
GGGACATCGA CCGGCAAGAC GACGCTGACC AATGCGCTGC TGGCCGAGGT CGCCAAGACC
TCCGACCGCG TCGTGCTGAT CGAGGACACG CGCGAGCTGC AATGCGCCGC GCCCAATCTG
GTCGCGCTGC GCACCAAGGA TGGCGTCGCC TCGCTCTCCG ATCTTGTCCG CTCCTCGCTT
CGCCTTCGGC CCGATCGCAT TCCGATCGGC GAGGTTCGCG GCCCCGAAGC CCTCGACCTC
TTGAAGGCCT GGGGCACCGG CCATCCCGGC GGCGTCGGCA CCATCCACGC CGGCACCGCC
ATCGGCGCGC TGCGCCGTCT CGAACAGCTC ATCCAGGAAG CCGTCGTCAC CGTGCCGCGC
GCGCTGATCG CCGAGACGAT CGACATCGTC GCGGTGCTTT CGGGCCGCGG TTCGCAACGC
CGCCTGGCCG AACTCGCCCG CGTCGAGGGG CTCGGCCCTT CCGGCGACTA CCAGATCAAA
CCGGCGGACG CGGCGTCGGC GGTCTTTCCC CCAGCAACCC CAGACCTATC GGGAGATCCC
GCATGA
 
Protein sequence
MLRTALGPAI AEFLDDPSVV EVMLNPDGRL WIDCLSEGLS DTGERLSPAD GERIIRLVAH 
HVGAEVHSGA PRVSAELPET GERFEGLLPP VVAAPAFAIR KPAVAVFTLS DYVAAGIMVA
SQAEVLRQAV AERRNILVAG GTSTGKTTLT NALLAEVAKT SDRVVLIEDT RELQCAAPNL
VALRTKDGVA SLSDLVRSSL RLRPDRIPIG EVRGPEALDL LKAWGTGHPG GVGTIHAGTA
IGALRRLEQL IQEAVVTVPR ALIAETIDIV AVLSGRGSQR RLAELARVEG LGPSGDYQIK
PADAASAVFP PATPDLSGDP A