| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3821 |
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| Symbol | |
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| ID | 5901283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4140541 |
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| End bp | 4141086 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641564343 |
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| Product | putative conjugal transfer protein precursor |
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| Protein accession | YP_001685445 |
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| Protein GI | 167647782 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.322448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCGCC TCGCCTACGT CATGACGACC TACGCAGCCG TGTTCACGAC CGTCGCACTG
TCGTTCCTCC ATGTCGCGCC CAGACTGATC TGGAATGCGT CGGCCAGCAC GCCGATCGGG
CTCTATTCCA TTGGTCCCGC CGGTCATCTG GAAGTGACGG ATCTCGTCGC CGTCGATGCG
CCGGAGCCGC TCGCCCGTTT CCTCGCCGAT GGCGGTTATC TACCGCGCGG CGTGCCGCTG
ATGAAGCGCG TCGTCGCCCT TCCGGGGCAA GAGGTCTGTC GCATCGGCCG CGACATCATG
GTCGATGGCA TCGCCATCGG CAGCGCGCTG GCGCGCGATC ATCGCGGTCG TGAGCTTCCG
GTTTGGCAAG GCTGCCGCCG CATCGCCGAT GGCGAAGTCT TCCTGATGAA CTGGCAGGTC
CGCGACAGCC TCGATGGCCG CTATTTCGGA CCAATCCCGG CCAGCGCGAT CATCGGCCAG
GCGCTGCCTG TGTGGACCGA TGAGCGCGGC GACGGCCGCT ACGTCTGGCG CGCGCCGACA
CGGTGA
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| Protein sequence | MTRLAYVMTT YAAVFTTVAL SFLHVAPRLI WNASASTPIG LYSIGPAGHL EVTDLVAVDA
PEPLARFLAD GGYLPRGVPL MKRVVALPGQ EVCRIGRDIM VDGIAIGSAL ARDHRGRELP
VWQGCRRIAD GEVFLMNWQV RDSLDGRYFG PIPASAIIGQ ALPVWTDERG DGRYVWRAPT
R
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