Gene Caul_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3703 
Symbol 
ID5901159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3998037 
End bp3999158 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID641564214 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001685328 
Protein GI167647665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0936689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CTTCTCCCTG GCTCACGGAC CTGGCCTTGC GCCTGGCCTG GGCTCCACCG 
TGGGCCGTCA GCCTGGGCCT GATCGTCGTC GCCGTGCTGG TCGCGCTCGT CACCCACTGG
GCCGTCGTGC GGATCGTTCG CCGCTCGCTG CGGAACGACG CCTTCTGGTC CGCCCTGGCC
GTGCGGACCC GGCGCCCCAC CCGCCTGGCC TTCATCACCG CCGCGCTCAG CCTGGCGGTC
GCCGTCGCGC CGCTCACCGC CGGCCAGGCC GCGGCCAGCA AGCGCGTCCT GCTGGTGCTG
TTCATCCTGC TGGTCGGCTG GATCGTGATG ACCGCGCTGG ACATCGCCGC GGCCCTGCAC
ATGCGCAAGT TCAATGTCGA CGTCGAGGAC AACCTGCTGG CGCGCAAGCA CCTGACCCAG
GTCAAGATCC TGCGCCGGGC CAGCGCGGTG GTGGTCGGCC TGATCACGGT CGGCCTGGCC
CTGATGACCA TCCCCGGCGT CCGCCAGTGG GGCGTCAGCC TGTTGGCGGC CGGCGGCGCC
GCCTCGCTGA TCGTGGGCCT GGCCCTGCAG CCGCTGCTGA CCAACCTGAT CGCCGGCATC
CAGATCGCCA TCACCCAGCC CATCCGTCTG GACGACGCGG TGCTCGTCGA GAAGGAGTGG
GGCAATATCG AGGAGATCAA CGCCACCTAT GTGGTCGTGC GGCTGTGGGA CTGGCGGCGC
ATGGTGCTGC CGCTCAGCTA CTTCATCCAG ACGCCGTTCC AGAACTGGAC CCGTGAATCA
GCGGCCCTGA TCGGCACGGC CATGCTCTAT GTCGATCACG CCGCCCCGAT CGACCGCCTG
CGCGCCAAGC TGGACGAGAT CGCCAAGGCC TCGCCCCTGT GGGACGGCAA GGTGGTCAAT
ATGCAGGTCA CCGACGTCAC CGCCCAGGTG CTGGAGGTGC GCTGCCTGAT CAGCGCCCGC
AGCGCACCCA AGGCCTTCGA CCTGCGCTGC GAGGTGCGGG AGAAGATGAT GGCCTTCCTG
CGCGACGAGG TCCCCGAAGC CCTGCCGAGG CAGCGACTGG GCTTATCGGA GGCGGCGCCC
CTTTACGGCG TGACCTCGGG CGGCGGGCGG ATGCGCCGGT AA
 
Protein sequence
MSASSPWLTD LALRLAWAPP WAVSLGLIVV AVLVALVTHW AVVRIVRRSL RNDAFWSALA 
VRTRRPTRLA FITAALSLAV AVAPLTAGQA AASKRVLLVL FILLVGWIVM TALDIAAALH
MRKFNVDVED NLLARKHLTQ VKILRRASAV VVGLITVGLA LMTIPGVRQW GVSLLAAGGA
ASLIVGLALQ PLLTNLIAGI QIAITQPIRL DDAVLVEKEW GNIEEINATY VVVRLWDWRR
MVLPLSYFIQ TPFQNWTRES AALIGTAMLY VDHAAPIDRL RAKLDEIAKA SPLWDGKVVN
MQVTDVTAQV LEVRCLISAR SAPKAFDLRC EVREKMMAFL RDEVPEALPR QRLGLSEAAP
LYGVTSGGGR MRR