Gene Caul_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3672 
SymbolmurE 
ID5901127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3967698 
End bp3969155 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content72% 
IMG OID641564183 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_001685297 
Protein GI167647634 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.181793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAAGA CCCTTTCGCA GATCCTGAAC CGGCCGTTCG AGGTCGATCC CGTCATCACC 
GGGGTCACCG CCGACAGCCG CAAGGTGCGT GAAGGGTTCC TGTTCGCGGC CCTGCCGGGC
AGCAAGGCCG ACGGCCGCAG CTTCATCGAC GGGGCGATCG CCTCGGGCGC CGCCGCGATC
CTGGCCCCGG ACGACGTCGA GGGCCTGTCG GTTCCGGTCG TCCATGCCGG CGACCTGCGC
CGCGCCTACG CCCTGGCCGC CGCCCAGTTC TGGGCCGAGC AGCCGGCGAC CTGCATCGCG
GTGACCGGCA CCAACGGCAA GACCTCGGTG GCCGGCTTCG CGCGCCAGAT CTACGCTCGC
CTCGGCCACA AGGCCGCCAG CATGGGCACC CTGGGCGTTG TGGTCAGTGG TCCCGGCATA
CCGGACCAGC AGCTGACCCC GCCCGGCCTG ACGACCCCCG ACGCCGCCGA CGTCGCCGAG
ATGATGGCCA GGCTGGCCGG CATGGGCGTG ACCCACCTGG CGGTCGAGGC CTCGTCGCAC
GGTATCGACC AGCGCCGCCT GGACGGCGTG CGCCTGGCCG CCGCCGGCTT CACCAACTTC
ACCCAGGACC ACCTGGACTA TCACGGCACC ATGGGCTGCT ACCGCGCGGC CAAGCTGAGG
CTGTTCGAGA CCCTGCTGCC GCGTGGCAAG ACCGCCGTGC TGAACGCCGA TAGCGACGCC
TTCCCGGCCT TCGCCTCGGC CGCCGTCACC TCGGGCCAGA CCATCCTCTC GGTCGGCCAC
GAGGGGCAGG GGCTCAAGCT TGTTTCGCAC ACGCCCGTGC CGCAAGGCCA GCGCCTGAAG
ATCGCCGCGC AGGACCGCGT GTTCGACGTG CTGTTGCCGC TGGCCGGCGA CTTCCAGGCC
TCCAACGTGC TGGTCGCGGC GGGTCTAGTG TTGGCGACCG GCGAGGATCT CGACGCGACA
ATCGCCGCCC TGGAGCACCT GGAAGGCGCG GCCGGCCGGC TGCAGCGCGT GGGAACCGGC
GCGCGCGGCG GCGAGGCCTA TGTCGACTAC GCCCATACGC CCGACGGGCT GGAGACGGTG
CTGGCCGCCC TGCGTCCCCA TACGCGCGGC AAGCTGATCG TGGTGTTCGG CGCCGGCGGC
GACCGCGACC GTGGCAAGCG TCCCTTGATG GGCGAGATCG CCGCGCGCCT GGCCGACGTG
GCCATCGTCA CCGACGACAA TCCCCGCTCT GAAGAGCCGG CCTCCATCCG CGCCGCCATC
CTGGCCGCCG CGCCCGGCGC CCAGGAATAT GGCGACCGCC GCGAGGCCAT CCGGGCGGGC
GCGGCCCTGC TGGCCGACGG CGACGTGCTG GTGGTGGCCG GCAAGGGGCA CGAGCAGGGC
CAATTGGTGG CCGGCGTGAA CCATCCGTTC GACGACGTCA CCGAGACCGC CCAGGCTTTG
GAGGCCGTCC ATGCCTGA
 
Protein sequence
MSKTLSQILN RPFEVDPVIT GVTADSRKVR EGFLFAALPG SKADGRSFID GAIASGAAAI 
LAPDDVEGLS VPVVHAGDLR RAYALAAAQF WAEQPATCIA VTGTNGKTSV AGFARQIYAR
LGHKAASMGT LGVVVSGPGI PDQQLTPPGL TTPDAADVAE MMARLAGMGV THLAVEASSH
GIDQRRLDGV RLAAAGFTNF TQDHLDYHGT MGCYRAAKLR LFETLLPRGK TAVLNADSDA
FPAFASAAVT SGQTILSVGH EGQGLKLVSH TPVPQGQRLK IAAQDRVFDV LLPLAGDFQA
SNVLVAAGLV LATGEDLDAT IAALEHLEGA AGRLQRVGTG ARGGEAYVDY AHTPDGLETV
LAALRPHTRG KLIVVFGAGG DRDRGKRPLM GEIAARLADV AIVTDDNPRS EEPASIRAAI
LAAAPGAQEY GDRREAIRAG AALLADGDVL VVAGKGHEQG QLVAGVNHPF DDVTETAQAL
EAVHA