| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3660 |
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| Symbol | ddl |
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| ID | 5901115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 3950014 |
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| End bp | 3950982 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641564171 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001685285 |
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| Protein GI | 167647622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.345164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCAG CCAACCCCAA GCCCCTCGCC AACCATCACA TCGCCGTCCT GCTCGGCGGT
CCTTCCGCCG AGCGTGAGGT CAGCTTGGTC ACCGGCGCGG CCTATGCCGC CGCCCTCGAG
CGCCTCGGCG CCCGCGTCAG CCGGGTCGAC CCTGGGAAGG ACGTCGCCCA GGTCCTGACC
GCTCTCGCGC CCGACCTGGT GTTCAACGGC CTGCATGGCC GCTGGGGCGA GGACGGCTGC
GTGCAGGGCG TGCTGGAGAC CCTGGGGCTG GCCTACACCC ATTCCGGCGT CTTGGCCTCG
GCCCTGGCGA TGGACAAGGC CAAGTCCAAG GCCGTGCTGG CGGCGGCGGG GATCCCCGTG
CCCGGCGGCG GGCTGTTCGA CCGCCACGAC GTCGCTCAGG GCCACGTGAT GCCGCCGCCC
TATGTGGTCA AGCCCAACGC CGAGGGCTCT TCGGTCGGGG TGTCTCTGGT CTTCGAAGGG
GCGAACGGCC CGCCGCGCCA ATTGGCCGCG CCCGACTGGG CTTTCGGCGA GCAGGTGATG
GTCGAGCCCT ATATCCCCGG GCTGGAGCTG GCGGTCGCGG TGGTGGGTGA GTCAAATGGT
CCCAGGGCCT TGGCGGTAAC CGAAATTCGC TCGTCCACAG GTTTTTACGA TTACGACGCC
AAGTACTCGC AGGGCGGCTC GATTCACGTC CTGCCCGCCC CGATTCCGGA CGCTGTAAGG
GATCGCGCCC TGCATCTCGC CAAGCTTGGC CATACAGCTC TTGGTTGCCA GGGTGTGACT
CGATCGGACT TCCGTTATGA CGACATTAAC GACCTTCTGG TGTTGCTAGA GGTCAATACG
CAGCCTGGCA TGACACCCAC TTCGCTCGTC CCCGAGCAGG CGGACCACGC CGGCGTCTCG
TTTGACCGTC TAGTGTTTTG GATCGTGGAG GACGCTTATG CCCGCAGGTT TGCGGGGGGG
ATCGCGTAA
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| Protein sequence | MTPANPKPLA NHHIAVLLGG PSAEREVSLV TGAAYAAALE RLGARVSRVD PGKDVAQVLT
ALAPDLVFNG LHGRWGEDGC VQGVLETLGL AYTHSGVLAS ALAMDKAKSK AVLAAAGIPV
PGGGLFDRHD VAQGHVMPPP YVVKPNAEGS SVGVSLVFEG ANGPPRQLAA PDWAFGEQVM
VEPYIPGLEL AVAVVGESNG PRALAVTEIR SSTGFYDYDA KYSQGGSIHV LPAPIPDAVR
DRALHLAKLG HTALGCQGVT RSDFRYDDIN DLLVLLEVNT QPGMTPTSLV PEQADHAGVS
FDRLVFWIVE DAYARRFAGG IA
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