Gene Caul_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3628 
Symbol 
ID5901083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3921094 
End bp3922101 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID641564139 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_001685253 
Protein GI167647590 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC CGCCCATTCT GCGCGACCGT CTGCGCCTGC CCGTCATCGC GTCGCCGCTG 
TTCATCATCA GCAATCCCGA CCTGGTGATT GCCCAGTGCA AGGCCGGCGT CGTCGGCTCG
TTCCCGGCGC TCAACGCCCG GCCGATCTCG CAACTGGACG AGTGGCTGGC GCGGATCACC
GAGGAGCTGG CGGCCCATGA CCGCGCCAAT CCCGACGCGC CCTCGGCCCC GTTCGCGGTC
AACCAGATCG TCCACAAGAG CAACAACCGG CTCGAGGAAG ACATCGCCAT GTGCGTGAAG
CACAAGGTCC CGGTGGTAAT CACCTCGCTG GGCGCTCGCG AGGATCTGAA CAGCGCGATC
CACAGCTACG GCGGCATCAC CCTGCACGAC GTCATCAACG ACAGGCACGC CCACAAGGCC
ATCGAGAAGG GCGCCGACGG CCTGATCCCG GTGGCCGCCG GGGCCGGCGG CCACGCGGGC
ACCCTGTCGC CGTTCGCTCT GATCCAGGAG ATTCGCGCCT GGTTCGACGG GCCGGTGGCC
CTGTCCGGGT CGATCGCCTG CGGTCGCTCG ATCCTGGCGG CCCAGGCCAT GGGCGCGGAC
CTGGCCTATA TCGGCTCGGC CTTCATCGCC ACGAAGGAAG CCAACGCGCC GCAGGGCTAC
AAGGACACCA TCGTCGAGGC GTCGGCCAAC GACATCGTCT ATTCCAACCT GTTCACCGGC
GTGCACGGCA ACTATCTGCG CCAGTCGATC GTCCGGGCGG GCCTGGACCC CGAGAACCTG
CCGGTCAGCG ATCCGTCGGC CATGAACTTC GGCTCGGGCG GCAATCAGGA GGCCAAGGCC
TGGCGCGACA TCTGGGGCTC CGGCCAGGGT GTCGGCGCCA TCGACACGGT GCTCTCGGTC
GGCGAACTGG TCGCCAAGTT CGCGGAGCAG TACGAGGAGG CCAAGGCGGA GCTGGCGGCC
AAGACCGCGC TGACTTCGGG AAGCCACCTG GCTTTCGCGG CCCAGTAG
 
Protein sequence
MALPPILRDR LRLPVIASPL FIISNPDLVI AQCKAGVVGS FPALNARPIS QLDEWLARIT 
EELAAHDRAN PDAPSAPFAV NQIVHKSNNR LEEDIAMCVK HKVPVVITSL GAREDLNSAI
HSYGGITLHD VINDRHAHKA IEKGADGLIP VAAGAGGHAG TLSPFALIQE IRAWFDGPVA
LSGSIACGRS ILAAQAMGAD LAYIGSAFIA TKEANAPQGY KDTIVEASAN DIVYSNLFTG
VHGNYLRQSI VRAGLDPENL PVSDPSAMNF GSGGNQEAKA WRDIWGSGQG VGAIDTVLSV
GELVAKFAEQ YEEAKAELAA KTALTSGSHL AFAAQ