Gene Caul_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3609 
Symbol 
ID5901064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3893237 
End bp3894100 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID641564120 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_001685234 
Protein GI167647571 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.763753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC TCCGCTACGG CCCCAGGGGC TCCGAAAAGC CAGGTCTCCT CGACGCCGAC 
GGCCAGATCC GTGACCTGTC GGGCCATGTC GCCGACATCA CCGGCGCGCA GCTGTCGCCG
GCCAGCCTCA AGGCCTTGGC CGCCATCGAT CCCAGGTCTC TGCCCCTGGT CGAAGGCTCG
CCCCGCTATG GCGTGCCGGT CAGCGGCGTC GGCAAGTTCA TCGCCGTCGG TTTGAACTTC
GCCGACCACG CCGCCGAGTC GAACCTGCCG ATCCCCGAGG AGCCGGTGCT GTTCACCAAG
GCCGTCAGTT GCCTGACCGG TCCGAACGAC CCGGTGATGA TCCCCAAGGA CTCGCTGAAG
ACCGACTGGG AAGTCGAGCT GGGCGTGGTG ATCGGTTCGC GCGCCCGCTA CGTGGATGAA
GCCTCCGCCC TCGACCATGT CGCCGGCTAC GTGCTGATCA ACGACGTCTC CGAGCGCGCC
TTCCAGATCG AGCGCGGCGG CACCTGGGAC AAGGGCAAGG GTTGCGACAC CTTCGGCCCG
GTCGGCCCGT GGATCGTGAC GTCCGACGAG GTCGGCGACC CGCAGAACCT GAGCATGTGG
CTGGACGTCA ACGGCCAGCG CAAGCAGGAC GGCTCCTCCA GGACCATGAT CTTCCCGATC
AGCAAGCTGG TGTCCTACAT CAGCGAATTC ATGACGCTGG AACCCGGCGA CCTGATCACC
ACCGGTACGC CGCCCGGTGT CGGCATGGGC CAGAAGCCGC AGCCCGTCTA TCTGAAGGCC
GGCGACGAGA TCCGCCTGGG CATCGAGACG CTGGGCGAGC AGCGCCAGAT CGTCGTGGCC
TGGACCCAGG ACGGGGTCGC CTGA
 
Protein sequence
MKLLRYGPRG SEKPGLLDAD GQIRDLSGHV ADITGAQLSP ASLKALAAID PRSLPLVEGS 
PRYGVPVSGV GKFIAVGLNF ADHAAESNLP IPEEPVLFTK AVSCLTGPND PVMIPKDSLK
TDWEVELGVV IGSRARYVDE ASALDHVAGY VLINDVSERA FQIERGGTWD KGKGCDTFGP
VGPWIVTSDE VGDPQNLSMW LDVNGQRKQD GSSRTMIFPI SKLVSYISEF MTLEPGDLIT
TGTPPGVGMG QKPQPVYLKA GDEIRLGIET LGEQRQIVVA WTQDGVA