Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3609 |
Symbol | |
ID | 5901064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 3893237 |
End bp | 3894100 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641564120 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_001685234 |
Protein GI | 167647571 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.763753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC TCCGCTACGG CCCCAGGGGC TCCGAAAAGC CAGGTCTCCT CGACGCCGAC GGCCAGATCC GTGACCTGTC GGGCCATGTC GCCGACATCA CCGGCGCGCA GCTGTCGCCG GCCAGCCTCA AGGCCTTGGC CGCCATCGAT CCCAGGTCTC TGCCCCTGGT CGAAGGCTCG CCCCGCTATG GCGTGCCGGT CAGCGGCGTC GGCAAGTTCA TCGCCGTCGG TTTGAACTTC GCCGACCACG CCGCCGAGTC GAACCTGCCG ATCCCCGAGG AGCCGGTGCT GTTCACCAAG GCCGTCAGTT GCCTGACCGG TCCGAACGAC CCGGTGATGA TCCCCAAGGA CTCGCTGAAG ACCGACTGGG AAGTCGAGCT GGGCGTGGTG ATCGGTTCGC GCGCCCGCTA CGTGGATGAA GCCTCCGCCC TCGACCATGT CGCCGGCTAC GTGCTGATCA ACGACGTCTC CGAGCGCGCC TTCCAGATCG AGCGCGGCGG CACCTGGGAC AAGGGCAAGG GTTGCGACAC CTTCGGCCCG GTCGGCCCGT GGATCGTGAC GTCCGACGAG GTCGGCGACC CGCAGAACCT GAGCATGTGG CTGGACGTCA ACGGCCAGCG CAAGCAGGAC GGCTCCTCCA GGACCATGAT CTTCCCGATC AGCAAGCTGG TGTCCTACAT CAGCGAATTC ATGACGCTGG AACCCGGCGA CCTGATCACC ACCGGTACGC CGCCCGGTGT CGGCATGGGC CAGAAGCCGC AGCCCGTCTA TCTGAAGGCC GGCGACGAGA TCCGCCTGGG CATCGAGACG CTGGGCGAGC AGCGCCAGAT CGTCGTGGCC TGGACCCAGG ACGGGGTCGC CTGA
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Protein sequence | MKLLRYGPRG SEKPGLLDAD GQIRDLSGHV ADITGAQLSP ASLKALAAID PRSLPLVEGS PRYGVPVSGV GKFIAVGLNF ADHAAESNLP IPEEPVLFTK AVSCLTGPND PVMIPKDSLK TDWEVELGVV IGSRARYVDE ASALDHVAGY VLINDVSERA FQIERGGTWD KGKGCDTFGP VGPWIVTSDE VGDPQNLSMW LDVNGQRKQD GSSRTMIFPI SKLVSYISEF MTLEPGDLIT TGTPPGVGMG QKPQPVYLKA GDEIRLGIET LGEQRQIVVA WTQDGVA
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