| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3590 |
|---|
| Symbol | |
|---|
| ID | 5901045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3874571 |
|---|
| End bp | 3876043 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641564100 |
|---|
| Product | NCS1 nucleoside transporter |
|---|
| Protein accession | YP_001685215 |
|---|
| Protein GI | 167647552 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.483466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCACG ACCAAGCCGG CAACACCCTC TGGAATCCGG ACCTGGCGCC GACCACGGCC
GACCAGCGCA CCTGGAAGGC GCGGCATTTC GCGGCCCTGT GGCTGGGCAT GGTCATCGCC
GTGCCGGCCT ACATGCTGGC CGCGGGCCTG ATCGAGCAGG GGATGTCGGC GAGCCAGGCG
GTGTGGGCCG TGCTGCTGGG CAATGTCATC GTGCTGATCC CGATGCTGCT GATCGGCCAT
GCCGGCGCGA AATGGGGCGT GCCCTACGCG GTGCTGGCCC GGGCTTCGTT CGGCTGGCGC
GGCGCTCGCG CGCCGGCCTT GGCCAGGGCG ATCGTCGCCT GCGGCTGGTA CGGCATCCAG
ACCTGGATCG GCGGCGGGGC GCTGCTGACC CTGCTGGGCG TGATGGTCGG CAAGAGCCTG
GTCGGACCAC TGATCCCGGT GCTGGGCATC GGCGTCGGCC AACTGCTGTC GTTCGCCGCC
TTCTGGCTGA TCCAGCTGCT GTTCGTCACC AAGGGCCTGG AGACCGTGCG CAAGCTCGAG
ACCTGGACCG CCCCGGTCAA GATCCTGGTC TGCGGCCTGC TGGTCTGGTG GGCGCTGTCC
AAGGCCGGGG GCCTGGGCCC CATCCTGCAC GAGCCCAGCG CCTACGACGC CGGCGGCGCC
AAGGCCGGCC GGTTCTGGAA GGACTTCGGC CCGGCCGTCA CCGCCATGAC CGGCTATTGG
GCGACCCTGG CCCTGAACAT CCCCGACTTC ACCCGCTTCG CCCGCACCCA GCGCGACCAG
ATCGTCGGTC AGGTCGTGGG CCTGCCCGGA CCCATGGCCC TGCTGGCGAC GATGAGCGTG
ATCGTCACCT CGGCCACGGT GCTGATCTTC GGCAAGCCGA TCTGGGACCC GGTGGCCCTG
GCCGGCGACA TCGGCGGGAT CGGCGTGCTG GTGGGCCTGC TGGTCATCAG CCTCGACACC
GTGTCGTGCA ACATCGCCGC CAACCTGGTG GGGCCGGCCT ACGACTTCTC GGCCCTGTGG
CCGAGCAAGA TCAGCTACCG CACCGGCGGC TACATCACCG CCGCGATCGG CGTGCTGATC
ATGCCGTGGA AGCTGCTGGA GAGCACGCAA GGCTACATCT TCGTCTGGCT GACCGGCTAC
GGCGCGCTGC TGGGGCCGGT GGCCGGGATC CTGATCGCCG ACTACTGGCT GCTGCGCCGC
GCCCGCCTGG ACGTCGAGGC GCTGTATGAT CGGACCGGGA GATATAGTTA CTTCAAGGGC
TGGAACCTGG CGGCCGTGGC GGCTTTCGTC ATCGGCGTCG CGCCGAACCT GCCGGGTTTC
CTGAAGGCGG CCGGCCTGCC GGCGGCGTCG GGGATCGGGG CGCCGTGGAC GGGGCTTTAT
GATTATGCGT GGTTCGTCGG GGCGGGGATC GCGGCGGGGG TCTACGTGGC GGCGATGCGG
TTGGGGGATG GGGCGCGGGC GTCGGCTGTT TAG
|
|---|
| Protein sequence | MDHDQAGNTL WNPDLAPTTA DQRTWKARHF AALWLGMVIA VPAYMLAAGL IEQGMSASQA
VWAVLLGNVI VLIPMLLIGH AGAKWGVPYA VLARASFGWR GARAPALARA IVACGWYGIQ
TWIGGGALLT LLGVMVGKSL VGPLIPVLGI GVGQLLSFAA FWLIQLLFVT KGLETVRKLE
TWTAPVKILV CGLLVWWALS KAGGLGPILH EPSAYDAGGA KAGRFWKDFG PAVTAMTGYW
ATLALNIPDF TRFARTQRDQ IVGQVVGLPG PMALLATMSV IVTSATVLIF GKPIWDPVAL
AGDIGGIGVL VGLLVISLDT VSCNIAANLV GPAYDFSALW PSKISYRTGG YITAAIGVLI
MPWKLLESTQ GYIFVWLTGY GALLGPVAGI LIADYWLLRR ARLDVEALYD RTGRYSYFKG
WNLAAVAAFV IGVAPNLPGF LKAAGLPAAS GIGAPWTGLY DYAWFVGAGI AAGVYVAAMR
LGDGARASAV
|
|---|
| |