Gene Caul_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3581 
Symbol 
ID5901036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3866088 
End bp3866987 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content64% 
IMG OID641564090 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001685206 
Protein GI167647543 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA TTAAACGGAA AACCCCCCTC ATCGCTCTCG TCGGCGCCAT GGCGCTGATG 
GTGAGCGCCC CGGCCTTCGC TCAGGACGCC GCGGCGCCTG CGCCGGCCAC CACTGAAGCC
GCTGCTCCGG CCGCCGCTGC CCCGGCCCCC GCCGCCGCGC CTGCCGAAGA GCCCCTGGAC
GCCGGCGTCG CCGCGACTGA GAAGATGAAA TCTCACTCGC TGACCCCGAT CGGCATGTTC
CTGTCGGCTC AGGCGGTGGT TAAGGTCGTG ATGATCGGTC TGATCCTCGC CTCGGTCTTC
TCCTGGGTCC TGCTGATCAC CAAGCTGTTC GAATTCGGCG CTCTGAACAA GCAATCGGAC
AAGTTCCTGG AAGCCTTCCG GGGCGCTCGT TCGATCGCCG ACATCGCCCG TATCGGTTCG
TCGGAAGAAT TCGAAGGCAA CCCGATGGCC GACATGGCCG CCGCGGCCGC CCAAGAAGTC
GAACTGTCGC GCCAAGCTGG CCTGGCTGTC GGTGGCGAGC ATCGTGACTC GACCCTGTCG
CGCGCGACCT ACGCCATCAA CGCGGTGCAA GCCTCGCTGG TTAAGCGTCT GTCGGGCGGC
ATGGTGTTCC TGGCCTCGGT CGGTTCGGCC GGTCCGTTCA TCGGTCTGTT CGGTACGGTC
TACGGGATCA TGACCTCGTT CATCGGTATC GCGAACACCA ACACGACCAA CCTGGCCGTC
GTCGCTCCCG GCATCGCCGA AGCGCTGCTC GCCACCGGTA TTGGTCTGTT CGCCGCTATC
CCGGCCGTTA TCTTCTACAA CTTCTTCCAA ACCCGCATCT CCGGCTACGG CACGCGTTCG
GAAGGCTTCG TCGCTGAACT GATGAACGCC ATCTCGCGCC AGCTCGACAA AGGGGCGTAA
 
Protein sequence
MLDIKRKTPL IALVGAMALM VSAPAFAQDA AAPAPATTEA AAPAAAAPAP AAAPAEEPLD 
AGVAATEKMK SHSLTPIGMF LSAQAVVKVV MIGLILASVF SWVLLITKLF EFGALNKQSD
KFLEAFRGAR SIADIARIGS SEEFEGNPMA DMAAAAAQEV ELSRQAGLAV GGEHRDSTLS
RATYAINAVQ ASLVKRLSGG MVFLASVGSA GPFIGLFGTV YGIMTSFIGI ANTNTTNLAV
VAPGIAEALL ATGIGLFAAI PAVIFYNFFQ TRISGYGTRS EGFVAELMNA ISRQLDKGA