| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3542 |
|---|
| Symbol | |
|---|
| ID | 5900997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3819516 |
|---|
| End bp | 3820859 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641564049 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001685167 |
|---|
| Protein GI | 167647504 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.667598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA AACACGTCCC GACCGACTAT CCGGATGCGG GTGCGGTCGA GCGCGTGGAG
CAGACGCTCC GTCAGATGCC GCCGTTGGTG TTCGCTGGGG AAGCCCGCCG GCTGAAGAGC
CTGCTGGGCG ACGTGGCCGA AGGACGCGCC TTCCTGCTGC AGGGCGGCGA CTGCGCCGAG
AGCTTCAAGG AATTCCACGC CGACAACATC CGCGACACCT TCCGCCTGAT CCTGCAGATG
GCGGTGGTGC TGACCTTCGC CGGCGGCAAG CCGGTGGTGA AGGTGGGCCG CATCGCCGGC
CAGTTCGCCA AGCCCCGCTC CGAACCGATC GAGACGATCG ATGGCGTGAC CTTGCCGTCC
TACCGGGGCG ACAACATCAA CGGCATGGAC TTCACGGCGC AGGAGCGCAT TCCCGATCCG
GATCGCCTGC TGCGCGCCTA CGGCCAGTCG GCGGCGACCC TGAACCTGCT GCGCGCCTTC
GCCAGCGGGG GTTACGCCGA CCTCTACAAC ATCCATCGCT GGACCCTGGG CTTCGTGGGC
GACAGCCCGC AGGGCGCCCG GTACCGCGAG CTCAGCGAAA AGATCAGCGA AGCCCTGACC
TTCATGGCGG CGGTCGGCGT CACGCCGGAA ACCCAGCCGG ACCTGAAGCG CGTCGAGTTC
TTCACCAGCC ACGAGGCCCT GTTGCTGGGC TTCGAGGAAG CCATGACCCG CGTCGATAGC
ACCTCGGGCG ACTGGTACGA CACCAGCGCC CACCTGCTGT GGATCGGCGA GCGCACCCGT
CAGCTGGACG GGGCGCACAT CGAATATATG CGCGGCATCA AGAACCCGAT CGGCCTCAAG
TGCGGCCCGA CCATGGAGGG CGACGACCTG CTGCGGCTGA TCGACGTGCT CAACCCGGCC
AACGAGCCGG GCCGCCTGAC CCTGTACGGC CGCTTCGGCT CGGACAAGAT CGCCGACCGC
CTGCCGCGCC TGATGAGGGC CACCAAGGCC GCCGGTCGTT CGGTGGTCTG GGCCACCGAC
CCGATGCATG GCAATACGCT GAAGGCCTCG ACCGGCTACA AGACCCGGCC GTTCGACCGC
ATCCTCTCGG AGGTGAAGTC GTTCGTCGAG ATCGCCAACG CCGAGGGCGT CCACCCCGGC
GGCGTGCACC TGGAAATGAC CGGCCAGAAC GTCACCGAGT GCCTGGGCGG CGCGCGGGCG
GTGTCGGAAG GCGATCTCGC CGACCGCTAC CACACCCATT GCGACCCGCG CCTGAACGGC
GAGCAGGCTC TGGAACTGGC GTTCCTGGTG GCCGAAAAGC TGAAGTCGGC GCGCGACGAC
CAGCGGCGCC TGGCCGCGGG ATAA
|
|---|
| Protein sequence | MPAKHVPTDY PDAGAVERVE QTLRQMPPLV FAGEARRLKS LLGDVAEGRA FLLQGGDCAE
SFKEFHADNI RDTFRLILQM AVVLTFAGGK PVVKVGRIAG QFAKPRSEPI ETIDGVTLPS
YRGDNINGMD FTAQERIPDP DRLLRAYGQS AATLNLLRAF ASGGYADLYN IHRWTLGFVG
DSPQGARYRE LSEKISEALT FMAAVGVTPE TQPDLKRVEF FTSHEALLLG FEEAMTRVDS
TSGDWYDTSA HLLWIGERTR QLDGAHIEYM RGIKNPIGLK CGPTMEGDDL LRLIDVLNPA
NEPGRLTLYG RFGSDKIADR LPRLMRATKA AGRSVVWATD PMHGNTLKAS TGYKTRPFDR
ILSEVKSFVE IANAEGVHPG GVHLEMTGQN VTECLGGARA VSEGDLADRY HTHCDPRLNG
EQALELAFLV AEKLKSARDD QRRLAAG
|
|---|
| |