Gene Caul_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3539 
Symbol 
ID5900994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3815997 
End bp3816647 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID641564046 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001685164 
Protein GI167647501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.439098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGAC TGGCGACACT TCTGGCGTTC GGCGCGGCGG TGCTCGCTCT ACAATTGACG 
CCCGGTCCCG ACATGATGCT GGTGATCGGC CGCGGCGTCG GCCAGGGCAG GCGGATCGCG
ATCCTGACGG TGCTGGGCGT CACCCTCGTG GCCGGCGTGG TCCAGGTTTC GTTGCTGGTG
CTGGGAGTCG CCTCACTGCT TCAAGCCTCG CCGCTGGCGT TCAAGGTTTT GCGCTGGATC
GGGGCGGCCT ATCTGGTCTG GCTGGGCGCG CGCCTGCTGT GGGCGAGTTT CCACCCTTCG
ACCAAGTCGC TCGCCGCGCC GCGCGTCTCG ACCTGGGCCG CCGTCCGCGA GGGGACGATC
AACAACCTGA CCAATCCCAA GCCCTGGTTG TTCATGTTCG CCTTTCTACC GCAGTTCGTC
GATCCGGCGC GTGGGCCTGT TTGGGCGCAA CTGCTGGTGC TGGGTCTGCT GCAGAAGCTG
TCGGGCGCCG TCGTCCTGGG CGTCGTGGCC TTGACCAGCG GCGCGCTTGG AAGCTGGCTG
GCGCGTCGTC CGGGCTTGCT GGCTTGGCAG GAGCGGTTCG CCGGCGTGGT TATGGTGAGC
TTGGGCGTGC GGTTGCTGCT GTGGGGCGAC GCGCGGCCGG CGCGGATCTG A
 
Protein sequence
MPGLATLLAF GAAVLALQLT PGPDMMLVIG RGVGQGRRIA ILTVLGVTLV AGVVQVSLLV 
LGVASLLQAS PLAFKVLRWI GAAYLVWLGA RLLWASFHPS TKSLAAPRVS TWAAVREGTI
NNLTNPKPWL FMFAFLPQFV DPARGPVWAQ LLVLGLLQKL SGAVVLGVVA LTSGALGSWL
ARRPGLLAWQ ERFAGVVMVS LGVRLLLWGD ARPARI