Gene Caul_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3409 
Symbol 
ID5900864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3681698 
End bp3682660 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID641563915 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001685034 
Protein GI167647371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.110257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0203193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CGCCCTCCAG CCCCCGCCGC GTCCTCGGTC CGGTCGCCCG CGCCGGCGAA 
CGCACCGACC GCCCGCGCGT CTCGTTCGAG TTCTTCCCGC CCAAGACCGA GCAGATGGAA
GAAAACCTGT GGGCGGCGAT CAAACGCCTG GCGCCGCTGG ACCCGGCCTT CGTCTCGGTG
ACCTACGGGG CTGGGGGTTC GACCCGCGAA CGCACCCACC GCACGGTCAA GCGCATCCTG
GAAGAAACCA GCCTCAAGCC CGCCGCCCAC CTGACGTGCG TCGGCGCCAG CCGCGCCGAG
GTGGACGAAG TGATCCGCGA ATACTGGGAG ACCGGCGTGC GCCACGTGGT GTCGCTGCGC
GGCGACCCGC CTCCCGGCGA GGGCGGCATC GGCGGCGTCT ATGTGCCCCG CGAGGACGGC
TACAAGAACG CCACCGAACT GACGGCGGCC CTGACCGCGA TCGCCCCCTT CAACGTGCTG
GTCGGCGTCT ATCCGGAAAA ACACCCCGAG AGCCCGTCGA TCGAGCACGA CATCGAGGTG
CTGAAGGCCA AGGTCGACGC CGGGGCCACG ATGGCGATCA GCCAGTTCTT CTTCGACACC
GACGCCTTCC TGCGGTTCGT CGATAAGGTC CGCGCGGCCG GGATCACCAT CCCGATCGTG
CCGGGCGTCA TGCCGGTGAC CAACTTCAAG GGCCTGGTGA AGATGTCCAA GGCCTGCGGG
ACGGCGGTGC CGGACTGGTT GACCAAGCTG TTCGACGGCC TGGACGATGA CGCCGACACC
CGCCGCCTCA TCGCCTGCTC GGTGGCCGCC GAAATGTGCG CCAAGCTGCA GGAGCAGGGC
TTCAGCGATT TCCACTTCTA CACCTTGAAC AGGGCCGACC TGGTCTACGC CATCTGCCGC
GTGCTGGGCG TGCGCGAGAC CGTTCCAGCT CCGTCCCCAA TCTCGGCGGA GGCGGCGGCG
TGA
 
Protein sequence
MTAPPSSPRR VLGPVARAGE RTDRPRVSFE FFPPKTEQME ENLWAAIKRL APLDPAFVSV 
TYGAGGSTRE RTHRTVKRIL EETSLKPAAH LTCVGASRAE VDEVIREYWE TGVRHVVSLR
GDPPPGEGGI GGVYVPREDG YKNATELTAA LTAIAPFNVL VGVYPEKHPE SPSIEHDIEV
LKAKVDAGAT MAISQFFFDT DAFLRFVDKV RAAGITIPIV PGVMPVTNFK GLVKMSKACG
TAVPDWLTKL FDGLDDDADT RRLIACSVAA EMCAKLQEQG FSDFHFYTLN RADLVYAICR
VLGVRETVPA PSPISAEAAA