| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3407 |
|---|
| Symbol | |
|---|
| ID | 5900862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3679653 |
|---|
| End bp | 3680729 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641563913 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_001685032 |
|---|
| Protein GI | 167647369 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.174744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0184405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TCACCACCCG AGCCGGCCGA ATCAAGGCCC TGAAGGCAGC CGCCAAGGAA
CGCATCCTGA TCCTCGACGG CTCGTGGGGC GTGATGTTCC AGAAGCGCAA GCTGAGCGAG
GCCGACTACC GCGCCGAACG CTTCGCCGAC TACGACGGCC AGATGAAGGG CAACAACGAC
ATCCTGTGCC TGACCCGGCC GGACATCGTC GCCGACCTGC ATCACCAGTA TTTCGCCGCC
GGAGCCGACA TCTCCGAGAC CAACACGTTC AGCGGCACCA CCATCGCCCA GGCCGACTAC
CGCCTCGGGG CCGACGTGGT GCGCGACATC AACTACGAGG GCGCGCGCAT CGCCCGCTCG
GTGGCCGACG AGTGGCTGGC CAAGGAGCCG GAAAAGCCGC GCTTCGTGGC CGGTTCGATC
GGTCCGTTGA ACGTGATGCT GTCAATGTCG TCGGACGTGA ACGACCCGGG CGCGCGCAAG
GTGACCTTCG ATCAGGTCTA CCAGGCCTAT CGCGAGCAGG TGATGGCGCT GCACGACGGC
GGCGTGGACC TGTTCCTGAT CGAGACCATC ACCGACACGC TGAACTGCAA GGCCGCGATC
AAGGCGATCA TGGACCTGGT CGACGAAGGC TACGAAGAGC TGCCGATCTG GATCAGCGGC
ACCATCACCG ACCGCTCGGG CCGCACCCTG TCGGGCCAGA CGGCCGAGGC CTTCTGGAAC
TCGATCAAGC ACTGCAAGCC GTTCGCCGTC GGCTTCAACT GCGCCCTGGG CGCCGACCTG
ATGCGCCCGC ACATCGCCGA GATGGCCCGC ATCGCCGACA CCCTGGTCGC GGCCTATCCC
AACGCCGGCC TGCCCAACGC CATGGGCGAG TATGACGAGG AGCCGCACCA GACCGGCCAC
CAACTGCACG AATGGGCCAA GGATGGCATC GTCAACATCC TGGGCGGCTG CTGCGGCACC
ACTCCAGACC ACATCAAGCA CGTCGCCGAC GAGGTGCGCG GCGTGAAGCC TCGCGCCATC
CCCGAGCGCC CCAAGGCCAT GCGCCTGGCG GGGCTTGAGC CGTTCGAGCT AGCTTAG
|
|---|
| Protein sequence | MTDLTTRAGR IKALKAAAKE RILILDGSWG VMFQKRKLSE ADYRAERFAD YDGQMKGNND
ILCLTRPDIV ADLHHQYFAA GADISETNTF SGTTIAQADY RLGADVVRDI NYEGARIARS
VADEWLAKEP EKPRFVAGSI GPLNVMLSMS SDVNDPGARK VTFDQVYQAY REQVMALHDG
GVDLFLIETI TDTLNCKAAI KAIMDLVDEG YEELPIWISG TITDRSGRTL SGQTAEAFWN
SIKHCKPFAV GFNCALGADL MRPHIAEMAR IADTLVAAYP NAGLPNAMGE YDEEPHQTGH
QLHEWAKDGI VNILGGCCGT TPDHIKHVAD EVRGVKPRAI PERPKAMRLA GLEPFELA
|
|---|
| |