Gene Caul_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3389 
Symbol 
ID5900844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3660371 
End bp3661282 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID641563895 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001685014 
Protein GI167647351 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.242226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGG AACTCGTCGC CGAGGGCCTG CGGTTTCCGG AAGGCCCGAT CGCCATGGCC 
GACGGCTCGG TGATCCTCAC CGAAATCCAG GGCCAGGTCC TGACCCGGGT CCATCCCGAT
GGGCGCAAGG AGACCGTGGC CGAGGTTCCT GGCGGCCCCA ATGGCGCGGC GATCGGTCCG
GACGGGGCGA TCTATGTCAC CAATAACGGC GGCAGCTTCC AGTTCATGGA CATGGGCGGC
CTCAACGTGC CCGGCCCCAC CCCGCCCAGC CACCAGGGCG GCTCGATCCA GCGGATCGAC
ATCGCCACCG GCGCGGTGAC CACGCTCTAC ACCGAATGCG ACGGCAAGAG GCTGGTCGGC
CCCAACGACC TGGTGTTCGA CAGGCAGGGC GGCTTCTGGT TCACCGACCA CGGCTGCAGC
ACGCCCGAGG GCCGCAAGTA CGGGGCGCTC TATTACGCCC TGGCCGATGG CTCCAAGATC
GTCCGCTGGC GCGACCACTT CGTCTCGCCC AACGGCGTGG GCCTCTCGCC CGACGAGAAG
ACCGTCTACA TGGCCGACAC CGTGCTCGGC CGGCTGTGGT CGTTCGACAT CGCCGCGCCT
GGCGTGCTGG CCGAGGCCGC GCCGCTGGCG CCGGGCAATG TGGTCTGCAC CCTGCCGGGC
TATCAACTGC TCGACAGCCT GGCGGTCGAG GCCGACGGCA AGGTCTGCGT GGCCACGATC
ATCAACGGCG GGATCACCGC GTTCTCGCCC GACGGAACGA CCGAGCACTT CGCCGTGCCG
GACGTGATCG TCACCAACAT CTGCTTCGGA GGCGCCGACC TGCGCGACGC CTGGATCACC
GCGTCGGGCA CCGGCAAGCT CTACAAGGCG CGGTGGCCGC GAGCGGGCTT GAGGCTGAAT
TTCAACGCCT AA
 
Protein sequence
MQLELVAEGL RFPEGPIAMA DGSVILTEIQ GQVLTRVHPD GRKETVAEVP GGPNGAAIGP 
DGAIYVTNNG GSFQFMDMGG LNVPGPTPPS HQGGSIQRID IATGAVTTLY TECDGKRLVG
PNDLVFDRQG GFWFTDHGCS TPEGRKYGAL YYALADGSKI VRWRDHFVSP NGVGLSPDEK
TVYMADTVLG RLWSFDIAAP GVLAEAAPLA PGNVVCTLPG YQLLDSLAVE ADGKVCVATI
INGGITAFSP DGTTEHFAVP DVIVTNICFG GADLRDAWIT ASGTGKLYKA RWPRAGLRLN
FNA