Gene Caul_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3356 
Symbol 
ID5900811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3634652 
End bp3635314 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641563862 
Productmajor intrinsic protein 
Protein accessionYP_001684981 
Protein GI167647318 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.47386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAT TCGTCGCCGA GTTCATCGGC ACGTTCGCCC TGGTGCTCTT TGGTTGCGGC 
GCGGCCGTCC TGGGCGGAGA CCATGTTGGA CAGCTGGGCA TAGCCTTGGC GTTTGGGTTC
GCGATCGTCG CCCTGGCCTA TGGCGTCGGT CCGGTGTCGG GTTGCCACGT CAATCCCGCG
GTCAGCCTGG CGGCCTTCGT GGCCGGGCGG ATGAGCGCCA AGGAGATGGC GCTCTACTGG
ATCGCCCAGT TCGCCGGCGC GACCGCGGGG GCCGGCGTCC TGCTGTTGAT CGCCGGATCC
ACCGCCCATG GCCTGGGTCA GAACGGCTGG GGTCCCGGCT ATCTCGGCGA ATATCCGCTG
CAGGCGGCCT TTCTCTTCGA GGTGGTGATG ACCGCGCTGT TCGTGATCGT CATCCTGGGC
TCGACCGGCA CCGACGCCGC GCCGGGCTTC GCCGGCCTGG GGATCGGCAT CGCCCTGGCG
GTGATCCACA TCGTCGGCAT CCAGGTGACC GGCGTCTCGG TCAATCCGGC TCGCAGCTTC
GGCCCAGCCA TCTTCGTCGG CGGCCAGGCC TTGGCGCAGC TGTGGCTGTT CTTCGTCGCC
CCGGCGATCG GCGCCGTGCT GGGCGCGCTG CTCTACCGTT TCAACCTGTT GAAGGTAGGC
TGA
 
Protein sequence
MSKFVAEFIG TFALVLFGCG AAVLGGDHVG QLGIALAFGF AIVALAYGVG PVSGCHVNPA 
VSLAAFVAGR MSAKEMALYW IAQFAGATAG AGVLLLIAGS TAHGLGQNGW GPGYLGEYPL
QAAFLFEVVM TALFVIVILG STGTDAAPGF AGLGIGIALA VIHIVGIQVT GVSVNPARSF
GPAIFVGGQA LAQLWLFFVA PAIGAVLGAL LYRFNLLKVG