Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3356 |
Symbol | |
ID | 5900811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3634652 |
End bp | 3635314 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641563862 |
Product | major intrinsic protein |
Protein accession | YP_001684981 |
Protein GI | 167647318 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.47386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAT TCGTCGCCGA GTTCATCGGC ACGTTCGCCC TGGTGCTCTT TGGTTGCGGC GCGGCCGTCC TGGGCGGAGA CCATGTTGGA CAGCTGGGCA TAGCCTTGGC GTTTGGGTTC GCGATCGTCG CCCTGGCCTA TGGCGTCGGT CCGGTGTCGG GTTGCCACGT CAATCCCGCG GTCAGCCTGG CGGCCTTCGT GGCCGGGCGG ATGAGCGCCA AGGAGATGGC GCTCTACTGG ATCGCCCAGT TCGCCGGCGC GACCGCGGGG GCCGGCGTCC TGCTGTTGAT CGCCGGATCC ACCGCCCATG GCCTGGGTCA GAACGGCTGG GGTCCCGGCT ATCTCGGCGA ATATCCGCTG CAGGCGGCCT TTCTCTTCGA GGTGGTGATG ACCGCGCTGT TCGTGATCGT CATCCTGGGC TCGACCGGCA CCGACGCCGC GCCGGGCTTC GCCGGCCTGG GGATCGGCAT CGCCCTGGCG GTGATCCACA TCGTCGGCAT CCAGGTGACC GGCGTCTCGG TCAATCCGGC TCGCAGCTTC GGCCCAGCCA TCTTCGTCGG CGGCCAGGCC TTGGCGCAGC TGTGGCTGTT CTTCGTCGCC CCGGCGATCG GCGCCGTGCT GGGCGCGCTG CTCTACCGTT TCAACCTGTT GAAGGTAGGC TGA
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Protein sequence | MSKFVAEFIG TFALVLFGCG AAVLGGDHVG QLGIALAFGF AIVALAYGVG PVSGCHVNPA VSLAAFVAGR MSAKEMALYW IAQFAGATAG AGVLLLIAGS TAHGLGQNGW GPGYLGEYPL QAAFLFEVVM TALFVIVILG STGTDAAPGF AGLGIGIALA VIHIVGIQVT GVSVNPARSF GPAIFVGGQA LAQLWLFFVA PAIGAVLGAL LYRFNLLKVG
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