Gene Caul_3307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3307 
Symbol 
ID5900762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3583818 
End bp3587027 
Gene Length3210 bp 
Protein Length1069 aa 
Translation table11 
GC content69% 
IMG OID641563813 
Productacriflavin resistance protein 
Protein accessionYP_001684932 
Protein GI167647269 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGT CGGCGCCCTT CATCAAGCGG CCGGTGGCGA CGGTTCTCCT GACCCTCGGC 
GTCGCCATGG CCGGGATCGC CGCCTTCTTC GTGCTGCCGG TCTCGCCCCT GCCGCAGGTG
GACTATCCGA CCATCTCGGT CTCGGCCAAC CTGTCGGGCG CCAGCCCCGA CACCATGGCC
TCCAGCGTCG CCACACCGCT GGAGCGGCGG CTGGGCGTGA TCCCCGGCGT CACCGAGATG
ACCTCGCAGA GCAATACTGG CTCGGCCCGG GTGACCCTGC AGTTCGACCT CAACCGCAAT
ATCGACGGCG CGGCGCGCGA GGTGCAGGCC GCGATCAACG CCGCCCGCTC CGACCTGCCG
GCCACGCTGC GCAGCAATCC CAGCTACCGC AAGCAGAACC CGTCCGACGC GCCGGTGATC
ATCCTGGCCC TGACCAGCGA CACCAAGAGC CCGGGCCAGA TCTACGATGC GGTGTCCAAC
ATCGTCGCCC AGCGCCTGGC CCAGGTGAGC GGGGTGGGCG ACGTCGAGAT CGGCGGCGGC
TCGCTGCCGG CCGTGCGGGT GTCGGTGAAT CCATTCCTGC TCAACACCTA CGGCATCGCC
CTGGAGGACG TGCGCGCCGC GGTGCAGGCC GCCAACGCCA ACCGGCCCAA GGGCGCGGTC
GAGGGGGCGG GCCAACGCTT CCAGGTCTAT ACCAGCCCCG GCGGACGCGT GGCGGCCGAC
TATGCCGGCC TGGTCGTGGC CTGGCGCGGC GACGCGCCGG TGCGGCTGAA GGACGTGGCC
GAGGTCACCG ACAGCGTCGC CGACACTCGC ACCCTGGGCC TGTTCAACGG CAAGCCGGCG
ATCATCATCC TGGTCACCCG CCAGCCGGGC GCCAACATCA TCCAGACCGT CGACAGCGTC
CGGGCCACCT TGCCAGAACT GCGCGCCCAA CTGCCCGCCG ACATCAATGT CGCGGTCGCC
TCCGACAGCA CCAACTCGAT CCGCGCCTCT CTGCATGAGA TCGAGGTGAC GCTGCTGATC
TCGATCGTGC TGGTCGTGTT GGTGGTCAGC GCCTTCCTGC GCAGCGCCCG GGCCACCTTC
ATCCCGGCGG CGGCGACCAT CGTCTCGCTG CTGGGCACGT TCGGGGTGAT GTACCTGCTG
GGCTTCAGCC TCAACAACCT CAGCCTGATG GCCATCACCG TCGCCACGGG TTTCGTGGTC
GACGACGCCA TCGTCGTGCT GGAGAACACC AGCCGCCACA TCGAAAAGGG CATGGACCGC
TTCGCCGCCG CCTTGCTGGG GGCGCGCGAG GTCGGGTTCA CCGTGCTGTC GATCAGCATA
TCGCTGGTCG CGGTGTTCAT TCCCCTGCTG TTCATGGGCG GCCAGGTGGG GCGGCTGTTC
CGCGAATTCG CCGTCACCCT GTCGGCCGCG GTGATGATCT CGCTGGTCAT CTCGCTGACC
ACCACCCCGA TGATGTGCGC CTACCTGCTG CGCCCGCCCA AGGAAGGCCA GAGGGAGGGC
CGGATCGCCC GCTGGTTCGA GGCCGGCTTC AACCGCGTGC ACAAGACCTA CGAGTACAGC
CTGGACTGGG CCCTGGCCGC CAAGCCGGTG GTGCTGCTGA TCCTGGTGGT GGTGGTCGCG
ATGACCGCTT GGCTCTATGT CGCCGTGCCC AAGGGCTTCT TCCCGCAGCA GGACAGCGGC
CAGATCCAGG CCGGGCTGCG GGCCGACCAG AGCGTGTCGT TCCACGTCAT GCAGGCCAAG
CTCAAGCAGG TGGTCAACAT CATCCGCAAG GATCCGGCGG TCGACACCGT GGTCGGCTTC
ACCGGCGGCG CCCGGGCCGG CGGCGGCTTT CTGTTCGTCA ATCTCAAGCC GCTGGGCAAG
GGCGCCGGCG ACCGCAAGGA CAAGGGCTCG GTGGTGATCA GTCGCCTGCG GCCGCAGTTG
CAGAAGGTCA CCGGCGTCAG CGTCTTCCTC AACCCCGTGC AGGACGTGCG GATGGGCGGG
CGCCAGAGCA ACTCGACCTA CCAATATACC CTGACCAGCG ACAACAGCGC CGCCCTCAAG
GCCTGGGCGC CCAAGCTGGC CGAGGCGATG AAGGCCCGCT CGGACGTGAT GACCGACGTC
GATAGCGACC AGTCCGAGAA CGGCGTCGAG ACCTTCGTCA CCCTGGATCG CGACAGCGCC
TCGCGCATGG GCGTCACGCC GCGCGCCGTC GACAACGCGC TCTACAACGC CTTCGGCCAG
CGGCAGATCG CCACGATCTA CGAGGACATC AATCAGTACG CCGTGATTAT GGAGTGGGAC
CGCCGGTTCT CGCGGGGGCC GGAATCGCTG AACGACGTCT ATGTGCCCAC CAAGCCCAAC
GGCGCCACGG GGGCGACGTC GACCAGCGGG GCGGCGGTCA ATCCGGCCCT GCGCGACCCC
TCGACCGGCT CGGCCCTGAA CACGGCGGCG ACGCCGATGA CGCCGCTGAT GGCGATCGCC
AGCGTCGCCC AGGCCGCCAC GCCCACCTCG ATCAACCACC AGAACGGCGA GCTGGCCACC
ACCGTCTCGT TCAACCTGGC CGACGGCGTG TCGCTCAGCC AGGCCCAGGC GGCCATCAGG
CAGGCCGAGG CCGACATCGG CCTGCCGACC AGCGTGCACG GCAGCTTCCA GGGCAGCGCC
AAGAGCGCCA ACGACACCAA CAAGCAGCAG CCCTTCCTGG TCGCAGCCGC GATCGTGGCG
ATCTACATCG TGCTGGGCAT TCTCTACGAG AGCTACGTCC ACCCGCTGAC CGTGCTGTCG
ACCCTGCCGT CCGCCGGGGT CGGGGCGATG CTGGCCCTGC TGATCTTCAA GATGGAGTTC
TCGGTGATCG CCCTGATCGG GGTGTTCCTG CTGCTGGGCA TCGTCAAGAA GAACGCCATC
CTGATCATCG ACTTCGCCCT GGAGGCCCAG CGCTCGCGCG GGCTGACGGC CATCGAGGCG
GTGCGCGAGG CCAGCTTGCT GCGCTTCCGG CCCATCCTGA TGACCACCCT GGCCGCCGCC
CTCGGCGCTC TGCCCCTGGC CATTGGCTTC GGGGAGGGCG CCGAACTGCG TCGCCCGCTC
GGGATCACCA TCATCGGCGG GCTGATCGCC AGCCAGCTGC TGACCCTGAT CACCACCCCG
GTGGTCTATG TCTATCTCGA CCGCCTGCGC GGCAAGAAGC GCGACGAGCG CTACCTGGCC
CACATGCCCC CCGCCCCGGA GCCCGTCTGA
 
Protein sequence
MNLSAPFIKR PVATVLLTLG VAMAGIAAFF VLPVSPLPQV DYPTISVSAN LSGASPDTMA 
SSVATPLERR LGVIPGVTEM TSQSNTGSAR VTLQFDLNRN IDGAAREVQA AINAARSDLP
ATLRSNPSYR KQNPSDAPVI ILALTSDTKS PGQIYDAVSN IVAQRLAQVS GVGDVEIGGG
SLPAVRVSVN PFLLNTYGIA LEDVRAAVQA ANANRPKGAV EGAGQRFQVY TSPGGRVAAD
YAGLVVAWRG DAPVRLKDVA EVTDSVADTR TLGLFNGKPA IIILVTRQPG ANIIQTVDSV
RATLPELRAQ LPADINVAVA SDSTNSIRAS LHEIEVTLLI SIVLVVLVVS AFLRSARATF
IPAAATIVSL LGTFGVMYLL GFSLNNLSLM AITVATGFVV DDAIVVLENT SRHIEKGMDR
FAAALLGARE VGFTVLSISI SLVAVFIPLL FMGGQVGRLF REFAVTLSAA VMISLVISLT
TTPMMCAYLL RPPKEGQREG RIARWFEAGF NRVHKTYEYS LDWALAAKPV VLLILVVVVA
MTAWLYVAVP KGFFPQQDSG QIQAGLRADQ SVSFHVMQAK LKQVVNIIRK DPAVDTVVGF
TGGARAGGGF LFVNLKPLGK GAGDRKDKGS VVISRLRPQL QKVTGVSVFL NPVQDVRMGG
RQSNSTYQYT LTSDNSAALK AWAPKLAEAM KARSDVMTDV DSDQSENGVE TFVTLDRDSA
SRMGVTPRAV DNALYNAFGQ RQIATIYEDI NQYAVIMEWD RRFSRGPESL NDVYVPTKPN
GATGATSTSG AAVNPALRDP STGSALNTAA TPMTPLMAIA SVAQAATPTS INHQNGELAT
TVSFNLADGV SLSQAQAAIR QAEADIGLPT SVHGSFQGSA KSANDTNKQQ PFLVAAAIVA
IYIVLGILYE SYVHPLTVLS TLPSAGVGAM LALLIFKMEF SVIALIGVFL LLGIVKKNAI
LIIDFALEAQ RSRGLTAIEA VREASLLRFR PILMTTLAAA LGALPLAIGF GEGAELRRPL
GITIIGGLIA SQLLTLITTP VVYVYLDRLR GKKRDERYLA HMPPAPEPV