Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3307 |
Symbol | |
ID | 5900762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3583818 |
End bp | 3587027 |
Gene Length | 3210 bp |
Protein Length | 1069 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641563813 |
Product | acriflavin resistance protein |
Protein accession | YP_001684932 |
Protein GI | 167647269 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGT CGGCGCCCTT CATCAAGCGG CCGGTGGCGA CGGTTCTCCT GACCCTCGGC GTCGCCATGG CCGGGATCGC CGCCTTCTTC GTGCTGCCGG TCTCGCCCCT GCCGCAGGTG GACTATCCGA CCATCTCGGT CTCGGCCAAC CTGTCGGGCG CCAGCCCCGA CACCATGGCC TCCAGCGTCG CCACACCGCT GGAGCGGCGG CTGGGCGTGA TCCCCGGCGT CACCGAGATG ACCTCGCAGA GCAATACTGG CTCGGCCCGG GTGACCCTGC AGTTCGACCT CAACCGCAAT ATCGACGGCG CGGCGCGCGA GGTGCAGGCC GCGATCAACG CCGCCCGCTC CGACCTGCCG GCCACGCTGC GCAGCAATCC CAGCTACCGC AAGCAGAACC CGTCCGACGC GCCGGTGATC ATCCTGGCCC TGACCAGCGA CACCAAGAGC CCGGGCCAGA TCTACGATGC GGTGTCCAAC ATCGTCGCCC AGCGCCTGGC CCAGGTGAGC GGGGTGGGCG ACGTCGAGAT CGGCGGCGGC TCGCTGCCGG CCGTGCGGGT GTCGGTGAAT CCATTCCTGC TCAACACCTA CGGCATCGCC CTGGAGGACG TGCGCGCCGC GGTGCAGGCC GCCAACGCCA ACCGGCCCAA GGGCGCGGTC GAGGGGGCGG GCCAACGCTT CCAGGTCTAT ACCAGCCCCG GCGGACGCGT GGCGGCCGAC TATGCCGGCC TGGTCGTGGC CTGGCGCGGC GACGCGCCGG TGCGGCTGAA GGACGTGGCC GAGGTCACCG ACAGCGTCGC CGACACTCGC ACCCTGGGCC TGTTCAACGG CAAGCCGGCG ATCATCATCC TGGTCACCCG CCAGCCGGGC GCCAACATCA TCCAGACCGT CGACAGCGTC CGGGCCACCT TGCCAGAACT GCGCGCCCAA CTGCCCGCCG ACATCAATGT CGCGGTCGCC TCCGACAGCA CCAACTCGAT CCGCGCCTCT CTGCATGAGA TCGAGGTGAC GCTGCTGATC TCGATCGTGC TGGTCGTGTT GGTGGTCAGC GCCTTCCTGC GCAGCGCCCG GGCCACCTTC ATCCCGGCGG CGGCGACCAT CGTCTCGCTG CTGGGCACGT TCGGGGTGAT GTACCTGCTG GGCTTCAGCC TCAACAACCT CAGCCTGATG GCCATCACCG TCGCCACGGG TTTCGTGGTC GACGACGCCA TCGTCGTGCT GGAGAACACC AGCCGCCACA TCGAAAAGGG CATGGACCGC TTCGCCGCCG CCTTGCTGGG GGCGCGCGAG GTCGGGTTCA CCGTGCTGTC GATCAGCATA TCGCTGGTCG CGGTGTTCAT TCCCCTGCTG TTCATGGGCG GCCAGGTGGG GCGGCTGTTC CGCGAATTCG CCGTCACCCT GTCGGCCGCG GTGATGATCT CGCTGGTCAT CTCGCTGACC ACCACCCCGA TGATGTGCGC CTACCTGCTG CGCCCGCCCA AGGAAGGCCA GAGGGAGGGC CGGATCGCCC GCTGGTTCGA GGCCGGCTTC AACCGCGTGC ACAAGACCTA CGAGTACAGC CTGGACTGGG CCCTGGCCGC CAAGCCGGTG GTGCTGCTGA TCCTGGTGGT GGTGGTCGCG ATGACCGCTT GGCTCTATGT CGCCGTGCCC AAGGGCTTCT TCCCGCAGCA GGACAGCGGC CAGATCCAGG CCGGGCTGCG GGCCGACCAG AGCGTGTCGT TCCACGTCAT GCAGGCCAAG CTCAAGCAGG TGGTCAACAT CATCCGCAAG GATCCGGCGG TCGACACCGT GGTCGGCTTC ACCGGCGGCG CCCGGGCCGG CGGCGGCTTT CTGTTCGTCA ATCTCAAGCC GCTGGGCAAG GGCGCCGGCG ACCGCAAGGA CAAGGGCTCG GTGGTGATCA GTCGCCTGCG GCCGCAGTTG CAGAAGGTCA CCGGCGTCAG CGTCTTCCTC AACCCCGTGC AGGACGTGCG GATGGGCGGG CGCCAGAGCA ACTCGACCTA CCAATATACC CTGACCAGCG ACAACAGCGC CGCCCTCAAG GCCTGGGCGC CCAAGCTGGC CGAGGCGATG AAGGCCCGCT CGGACGTGAT GACCGACGTC GATAGCGACC AGTCCGAGAA CGGCGTCGAG ACCTTCGTCA CCCTGGATCG CGACAGCGCC TCGCGCATGG GCGTCACGCC GCGCGCCGTC GACAACGCGC TCTACAACGC CTTCGGCCAG CGGCAGATCG CCACGATCTA CGAGGACATC AATCAGTACG CCGTGATTAT GGAGTGGGAC CGCCGGTTCT CGCGGGGGCC GGAATCGCTG AACGACGTCT ATGTGCCCAC CAAGCCCAAC GGCGCCACGG GGGCGACGTC GACCAGCGGG GCGGCGGTCA ATCCGGCCCT GCGCGACCCC TCGACCGGCT CGGCCCTGAA CACGGCGGCG ACGCCGATGA CGCCGCTGAT GGCGATCGCC AGCGTCGCCC AGGCCGCCAC GCCCACCTCG ATCAACCACC AGAACGGCGA GCTGGCCACC ACCGTCTCGT TCAACCTGGC CGACGGCGTG TCGCTCAGCC AGGCCCAGGC GGCCATCAGG CAGGCCGAGG CCGACATCGG CCTGCCGACC AGCGTGCACG GCAGCTTCCA GGGCAGCGCC AAGAGCGCCA ACGACACCAA CAAGCAGCAG CCCTTCCTGG TCGCAGCCGC GATCGTGGCG ATCTACATCG TGCTGGGCAT TCTCTACGAG AGCTACGTCC ACCCGCTGAC CGTGCTGTCG ACCCTGCCGT CCGCCGGGGT CGGGGCGATG CTGGCCCTGC TGATCTTCAA GATGGAGTTC TCGGTGATCG CCCTGATCGG GGTGTTCCTG CTGCTGGGCA TCGTCAAGAA GAACGCCATC CTGATCATCG ACTTCGCCCT GGAGGCCCAG CGCTCGCGCG GGCTGACGGC CATCGAGGCG GTGCGCGAGG CCAGCTTGCT GCGCTTCCGG CCCATCCTGA TGACCACCCT GGCCGCCGCC CTCGGCGCTC TGCCCCTGGC CATTGGCTTC GGGGAGGGCG CCGAACTGCG TCGCCCGCTC GGGATCACCA TCATCGGCGG GCTGATCGCC AGCCAGCTGC TGACCCTGAT CACCACCCCG GTGGTCTATG TCTATCTCGA CCGCCTGCGC GGCAAGAAGC GCGACGAGCG CTACCTGGCC CACATGCCCC CCGCCCCGGA GCCCGTCTGA
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Protein sequence | MNLSAPFIKR PVATVLLTLG VAMAGIAAFF VLPVSPLPQV DYPTISVSAN LSGASPDTMA SSVATPLERR LGVIPGVTEM TSQSNTGSAR VTLQFDLNRN IDGAAREVQA AINAARSDLP ATLRSNPSYR KQNPSDAPVI ILALTSDTKS PGQIYDAVSN IVAQRLAQVS GVGDVEIGGG SLPAVRVSVN PFLLNTYGIA LEDVRAAVQA ANANRPKGAV EGAGQRFQVY TSPGGRVAAD YAGLVVAWRG DAPVRLKDVA EVTDSVADTR TLGLFNGKPA IIILVTRQPG ANIIQTVDSV RATLPELRAQ LPADINVAVA SDSTNSIRAS LHEIEVTLLI SIVLVVLVVS AFLRSARATF IPAAATIVSL LGTFGVMYLL GFSLNNLSLM AITVATGFVV DDAIVVLENT SRHIEKGMDR FAAALLGARE VGFTVLSISI SLVAVFIPLL FMGGQVGRLF REFAVTLSAA VMISLVISLT TTPMMCAYLL RPPKEGQREG RIARWFEAGF NRVHKTYEYS LDWALAAKPV VLLILVVVVA MTAWLYVAVP KGFFPQQDSG QIQAGLRADQ SVSFHVMQAK LKQVVNIIRK DPAVDTVVGF TGGARAGGGF LFVNLKPLGK GAGDRKDKGS VVISRLRPQL QKVTGVSVFL NPVQDVRMGG RQSNSTYQYT LTSDNSAALK AWAPKLAEAM KARSDVMTDV DSDQSENGVE TFVTLDRDSA SRMGVTPRAV DNALYNAFGQ RQIATIYEDI NQYAVIMEWD RRFSRGPESL NDVYVPTKPN GATGATSTSG AAVNPALRDP STGSALNTAA TPMTPLMAIA SVAQAATPTS INHQNGELAT TVSFNLADGV SLSQAQAAIR QAEADIGLPT SVHGSFQGSA KSANDTNKQQ PFLVAAAIVA IYIVLGILYE SYVHPLTVLS TLPSAGVGAM LALLIFKMEF SVIALIGVFL LLGIVKKNAI LIIDFALEAQ RSRGLTAIEA VREASLLRFR PILMTTLAAA LGALPLAIGF GEGAELRRPL GITIIGGLIA SQLLTLITTP VVYVYLDRLR GKKRDERYLA HMPPAPEPV
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