Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3188 |
Symbol | |
ID | 5900643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 3451921 |
End bp | 3453486 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641563692 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001684813 |
Protein GI | 167647150 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.477871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACC AGGACTCCTC TCCCGCAGCC GCCAGCGGCC CAGCGCCGCT GACCGGCATG ATGCTGGCGG TCACCTCGAT CGCCCTGGCG CTGGGCACTT TCATGCAGGT GCTGGACAGC ACCATCGCCA ACGTCTCGAT CCCGACCATC GCCGGCAATC TGGGGGTCAG CACCAGCCAG GGCACCTGGG TGATCACCTC GTTCGCGGTG GCCAACGGCG TCTCGGTGCC GCTGACCGGC TGGCTGATGG GTCGCTACGG CGTCGTGAAG ACTTTCGTGG TCTCGGTGCT GCTGTTCACC CTCGCCTCGT TCCTGTGCGG CGTTTCGTGG AACCTGCCGT CGCTGATCGG CTTTCGGATT CTGCAGGGCC TGGTCTCGGG TCCGATGATC CCGGGCTCGC AGGCCCTGCT GATCATGATC TTTCCGGCCA GCAGGCGGGG CACGGCCCTG GCCATCTGGT CGATGACCAC ACTGGTGGCG CCGATCTGCG GCCCGATCCT GGGCGGCTAC ATCTCCGACA ACATCGCCTG GGAATGGATC TTCCTGATCA ACGTACCCGT CGGCCTGCTC TGCGCCTTCC TGTGCTGGCG CGGGATGAAC AACCGCGAGA CCCCGACCCG CAAGGTGCCG ATCGACACCA CCGGCTTCAT GCTGCTGCTG GTCTGGGTCG GCGCCCTGCA AGTGATGCTC GACACCGGCA AGGACGCCGA CTGGTTCAAC TCGCCGGCCA TCGTCGTCGA GACCCTGGTG GCCATCGTCG GCTTCATCGC CTGGGTGATC TGGGAGCTGA ACGAGAAGCA TCCGATCGTC GACCTGTCGC TGTTCAAGTC CAAGAACTTC GCCCTGGGCA CGGTCGCCTT CTGCCTGGGC TACGCGGTGT TCTTCGGCAG CAATCTGCTG CAGCCGCTGT GGCTGCAAAC CCAGATGCAC TACATCGCCA CCTGGGCCGG CCTGGTCGCC GCCCCCAGCG GCGTGGTGGC CGTGCTGCTG ACCCCGTTCG CCGCCCGCAT CATGCAGAAG GTCGACGCCC GCTGGACCGC CACCCTGTCG CTGGCCGCGT TCGCCCTGTC GTTCTACATG CGCTCGGGCT TCACGCCGGA CGTGGACTTC AAGGCCCTGG TTTGGCCGAT GCTGGTGCAG GGGGTGGCGA TGAGCACCTT CTTCCTGTCG ATGGTGACCA TCTCGCTGAA CGGCGTGTCG CCCCAGCAAC TGCCGTCGGC CTCGGGCCTG TCGAACTTCT CGCGGATCAC CGCGGGCAGC TTCGCGGCCT CGCTGACCAC GACGATCTGG GACCGGGGCG AAAGCCTGCA CCAGAACCGC ATCGCCGAAT CCATGGCCTC GAACGACCCG GCCTGGCTGG CGGCCGTGGA CCACATGCAG GCCGCGGGCC TGAGCCACGC CCAGGCCGTG GGCGCGGTGA CCGCCCAGGT CGTCAACCAG GCTTACCTCC TGTCGACCCT CGACTTCTTC CGCGCTTCGG CTTGGCTGGC GGTCCTGCTG ATCCCATGCA TCTGGCTGAC CAAGAAGGCG ATGAGCGGCG GCGGCGCGCA CGCGGCGGCC GACTAG
|
Protein sequence | MADQDSSPAA ASGPAPLTGM MLAVTSIALA LGTFMQVLDS TIANVSIPTI AGNLGVSTSQ GTWVITSFAV ANGVSVPLTG WLMGRYGVVK TFVVSVLLFT LASFLCGVSW NLPSLIGFRI LQGLVSGPMI PGSQALLIMI FPASRRGTAL AIWSMTTLVA PICGPILGGY ISDNIAWEWI FLINVPVGLL CAFLCWRGMN NRETPTRKVP IDTTGFMLLL VWVGALQVML DTGKDADWFN SPAIVVETLV AIVGFIAWVI WELNEKHPIV DLSLFKSKNF ALGTVAFCLG YAVFFGSNLL QPLWLQTQMH YIATWAGLVA APSGVVAVLL TPFAARIMQK VDARWTATLS LAAFALSFYM RSGFTPDVDF KALVWPMLVQ GVAMSTFFLS MVTISLNGVS PQQLPSASGL SNFSRITAGS FAASLTTTIW DRGESLHQNR IAESMASNDP AWLAAVDHMQ AAGLSHAQAV GAVTAQVVNQ AYLLSTLDFF RASAWLAVLL IPCIWLTKKA MSGGGAHAAA D
|
| |