Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3186 |
Symbol | |
ID | 5900641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 3449198 |
End bp | 3450706 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641563690 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001684811 |
Protein GI | 167647148 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.753905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAC AGTACGGTCA ATTCAAGGTC GGCTCACTTA TGACCCCGAA CGCCCTGGAC AATTCATCCC CCGCCAAGTC GGCCAGGTCC CGCGATATCG GCGTCACGGT TTCGATCCTG CTGGCCGCCC TTCTGACCAG CGCCTGCGCC ACGATGCCGG ACGCGACGCC AGCCCGGGTC GCCAAGGCGC CAGACGCCTA CGCCACGGCC CAGAGCTTGG CTACCACCAC CGACGCCGCC TGGCCGGTCG ACACCTGGTG GAAGGCCTAT GGCGACACCC AGCTCGACAG CCTGATCGAC GAGGCCCTGA TCGGCTCGCC CACCCTGGCT CAGGCCGAGG CCCGCCTGCG CCGCGCCCAG GCTCTGGCCA ACCAGGCCAA GGCCGCGCAA CGGCCCAGCG TGTCGGCCAG TGGCGGCGTC GAGCGATCCA AGCAGAGCTA TAACAACGGC ATACCCGCCG ACTTCGTGCC TCAGGGCTAC AACGACTACG GCCGGTTGAG CCTGGACTTC AGCTGGGAAC TGGACTTCTG GGGCAAGAAC CGCGCGGCCG TCGCCGCCGC GACCTCCGAA GCCCGGGCCG CCCAGGCCGA CGCCGCCCAG GCCCGCCTGA TGCTGGCCAC CTCGGTCGCC GCCGCCTACG CCGATCTCGC CCGTCTTTAC GCCGAGCGCG ACGTAGCCGA ACGGTCCGTG GCCCTGCGAC AGGAGACGCT GCATCTGGTC AGCGACCGGG TGACCAACGG CCTCGACACC CGGGGCGAGC TGCGTCAGGC CGAGGCTGGC CCGCCGAACG CCCGCGCCGA ACTGGCCGCC ATCGACGAGC AGATCGCCCA GACCCGCAAC GGCCTGGCCG CCTTGCTGGG GGCCGGTCCA GACCGCGGAC TGACGATCGT CCGACCGGCG GTCGCCAGCC TCAAGCCGTT CGGCCTGCCC GCCAACCTCG CCGCCGATCT GATCGGCCGC CGCCCCGACG TCGTGGCCGC CAAGTGGCGC GCCGAGGCCA GCAGCAAGCG GATCGGCCAG GCCAAGGCGG CCTTCTATCC CAACGTGAAC CTCGCCGCCG CGATCGGCGT GCAGTCCCTG CACCTGGACA AGCTGTTCGA TAGCGGCTCC GACGTCGGCA GCGTCGGCCC GGCCGTCAGC CTGCCAATCT TCGAGGGCGG ACGCCTGAAG GCCAACCTCC GCGCCGCTGA GGCCGACCGC GACGGCGCCG TGGCCGCCTA CGACTCCGCC GTCACCCAGG CCCTGCGTGA CGTCGCCGAC GTGGCCGCCA GCGAGCGCGC CCTCGACAAG CGTCTGAGCG AAAGCCGCGC CGCCCTCGCC GCCAACGAGG ATGGCTACCG CATCGCCAAG CTGCGCTACC AGGGCGGTCT GTCGACCTAT CAGAACGTGC TGATCGTCGA ACAGGCGCTG CTGACCCAGC GGCGGATCGT CGCCGACCTG GAAAGCCGCG CCCTGGCCCT GGACGTCGCC CTGGTGCGCG CCTTGGGCGG CGGCTTCACG CCCGCCTGA
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Protein sequence | MTVQYGQFKV GSLMTPNALD NSSPAKSARS RDIGVTVSIL LAALLTSACA TMPDATPARV AKAPDAYATA QSLATTTDAA WPVDTWWKAY GDTQLDSLID EALIGSPTLA QAEARLRRAQ ALANQAKAAQ RPSVSASGGV ERSKQSYNNG IPADFVPQGY NDYGRLSLDF SWELDFWGKN RAAVAAATSE ARAAQADAAQ ARLMLATSVA AAYADLARLY AERDVAERSV ALRQETLHLV SDRVTNGLDT RGELRQAEAG PPNARAELAA IDEQIAQTRN GLAALLGAGP DRGLTIVRPA VASLKPFGLP ANLAADLIGR RPDVVAAKWR AEASSKRIGQ AKAAFYPNVN LAAAIGVQSL HLDKLFDSGS DVGSVGPAVS LPIFEGGRLK ANLRAAEADR DGAVAAYDSA VTQALRDVAD VAASERALDK RLSESRAALA ANEDGYRIAK LRYQGGLSTY QNVLIVEQAL LTQRRIVADL ESRALALDVA LVRALGGGFT PA
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