| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3165 |
|---|
| Symbol | |
|---|
| ID | 5900620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3432148 |
|---|
| End bp | 3432723 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641563669 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_001684790 |
|---|
| Protein GI | 167647127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG CCGTCGCTTT CCTGCAACCG GGCTGGGCCG ACTGGGAGGC CGGGCCGGTG
CTGGCCGCCC TGCGCGAGTA CTATGGCGTC CAGATCGAGA TCGCCACGCC CGACGGCGAG
CCGCAGACCT CGATCGGCGG GGTGCTGGCG GCGGCCGACT ACAGATTCGC CGATCCGGCG
CTGGCCGACG CCGATGTGCT GCTGCTGATC GGCTCGGACG CCTGGACCAC CTATGACGAC
CCGGCGCTGT TCAGCCTGCT GCGCCAGACC CAGGCCGACG GCAAGATCGT CGGCGCGATC
TGCGCCGGCA CGGTCGCCGC CGCCCGGGCC GGTCTGCTGG CCGGCAAGGC CCACACCTCC
AACGACCGCG ATTGGCTGGT CAAGGTCGCG CCGGGCTATG CGGGGGCCGA GGGCTATGTC
GATAGCCCAA AGGCGGTGAC CGACGGCAAG CTGGTCACCG CCTCGGGTCT GGCGCCCGTG
ACGTTCAGCG CCGCCATCGC CCGGCTTGTC GCCCCCGAGG CGGGCGACAA GCACGACGAG
TATGTGGCGA TGTTCGCCAA GGAGTTCGGG GTTTGA
|
|---|
| Protein sequence | MTVAVAFLQP GWADWEAGPV LAALREYYGV QIEIATPDGE PQTSIGGVLA AADYRFADPA
LADADVLLLI GSDAWTTYDD PALFSLLRQT QADGKIVGAI CAGTVAAARA GLLAGKAHTS
NDRDWLVKVA PGYAGAEGYV DSPKAVTDGK LVTASGLAPV TFSAAIARLV APEAGDKHDE
YVAMFAKEFG V
|
|---|
| |