| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3146 |
|---|
| Symbol | |
|---|
| ID | 5900601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3409598 |
|---|
| End bp | 3410905 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641563649 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001684771 |
|---|
| Protein GI | 167647108 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.177037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCA AGCTTACCGC CGTCCGCTCT GCTCTCGCCG CTGTCGGCCT CGCCGGCGCC
CTGCTGTGCG GCCTGACCAC GCCGACGGTC GCCGCCGCGC AGATCCCGTA TCTGCAGCTC
AATAGCGCCG AGCCCAAGTA CGCCGCGATC GTGATCGACG CCAATTCGGG CGAAATGCTT
TACGACAAAA GGGCCGACAG CCCGCGCTAT CCCGCCTCGG TCACCAAGGT CATGACCTTG
TACCTCACCT TCGAGGCGCT CAGCGAAGGC CGCCTGAAGC TGACCGACCG CGTGCCGTTC
ACCGCGCGCG CCGCCGCCCA GGCGCCGACC AAGCTAGGCC TGCCCCCCGG CGACTCGATC
AGTGTCGACG AAGCGATTCG CGCCATGACC GTGAAGTCGG CCAATGACGT GGCCGTGGCC
ATGGCCGAGA GGTTGGGCGG CAGCGAATCG CGCTTCGCCG CCCTGATGAC CCTGCGTGGC
CAGGAACTGG GCATGCGCAA CAGCCGCTTC GTCAACGCCT CGGGCCTGCC CGACAGCCGC
CAGATCAGCA CCGCCCGGGA CCTGGCCATC CTGTCGCGCG CCACCATGCG CGACTTCCCG
CAGTACTATT CCTATTTCAG CATCAAGGGC TTCGAGTTCC GCGGTCGCTA CATCGCCGGC
CACAACCGCC TGCTGACCAA CATGCCCGGC TTCGACGGCC TGAAGACCGG CTACACCAAC
GCCTCGGGCT ACAACCTCGC CGGCTCGGCC GTGCGCGACG GTCGCCGCCT GATCGCCGTA
GTCCTGGGCG GCTCGTCCAC CGCCTGGCGC GACAACAACA TGGAAGACCT GTTGACCACC
GGCTTCGACG TGCTCAAGCG CCGCTCGCAC GGCGAGCGCA CGACCATCGC CGCCAACCTC
TATGAAGACG AGCCGACCGG CCCGATCATG CGCCCCTCCT CGGAGGAAGG CGACGGCGAC
CAGGCCGGCC TGAAGATCGT GCTGACCGAC AACCCCAAGC CCCCCGCCCC GCTGAAGGTC
TCGCCCACGC TGCGCGCCGC CCAGGCTTCG ACCAAGCCCG CGAAGAAGGC CGCCGGCGAA
TGGTCGGTGC AGGTCGGGGC GTTCAAGTCC AAGGCCCTGG CCCGGGAGCA ACTGTCGCTG
GTGCGCTCGC GCTTCGCCAA GGTCGTCAGC AACGCCGAGG GCGCGGTTGA GGGCGCCGAG
GGCGCTTTCC GGGCTCAGTT CCAGGGCATG ACGGCCGACG CCGCCCGTGG GGCCTGCAAG
GCGATCAGCG CCAAGCGCCA GCCCTGCATG ATCCTCGCCC CGCGCTAG
|
|---|
| Protein sequence | MFAKLTAVRS ALAAVGLAGA LLCGLTTPTV AAAQIPYLQL NSAEPKYAAI VIDANSGEML
YDKRADSPRY PASVTKVMTL YLTFEALSEG RLKLTDRVPF TARAAAQAPT KLGLPPGDSI
SVDEAIRAMT VKSANDVAVA MAERLGGSES RFAALMTLRG QELGMRNSRF VNASGLPDSR
QISTARDLAI LSRATMRDFP QYYSYFSIKG FEFRGRYIAG HNRLLTNMPG FDGLKTGYTN
ASGYNLAGSA VRDGRRLIAV VLGGSSTAWR DNNMEDLLTT GFDVLKRRSH GERTTIAANL
YEDEPTGPIM RPSSEEGDGD QAGLKIVLTD NPKPPAPLKV SPTLRAAQAS TKPAKKAAGE
WSVQVGAFKS KALAREQLSL VRSRFAKVVS NAEGAVEGAE GAFRAQFQGM TADAARGACK
AISAKRQPCM ILAPR
|
|---|
| |