Gene Caul_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3130 
Symbol 
ID5900585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3393008 
End bp3393655 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID641563633 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001684755 
Protein GI167647092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.376796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGT CGGCCTGGCC CGTCGATCCC GGCCTGATCG TTCCCTTCCT GGCGGCGATC 
CTGCTGATCG AGCTGACGCC CGGGCCGAAC ATGGGTTATC TCGCCGCGCT GTCGGTCGTT
CATGGCCGGC GCGCGGGCTT TTACGCGGTG GCGGGCGTCA CCTGTGGCCT CGCGGTCTAC
ATGTTCGCCG CCGTGTTCGG CCTGACGGAG GCGTTTCGCC TCTATCGACC CCTGTACGAA
CTGCTGCGCT GGGCCGGCGT CGCCTATCTG ATCTGGCTGG CGTGGGACGC CTGGCGGGCC
GCCGACGGCC ACGATCCGGG CGCGGACCTC CTGTCGCGAC CGTGGGCGTT GTTCCAACGC
GGTTTTCTGG CCAACATTCT CAACCCCAAG GCGGCGCTGT TCTACGTCAC CCTGCTGCCG
GGGTTCATCG CGGTGGATCA CGGACCGCCG GCCCGCCAAG CCCTGATCTT AGGCGGCCTT
CACGTCCTGG TCAGCATCAT GATCCACGGC TCCATCGTCC TGTCGGCGGA CAAGGCGGGG
CGACTGCTGG CGCGGGTGGC GTCGAGCGCC TGGGTGTCGC GGGGCCTGGC GATCTCGATC
CTGGTGGTGG CGATCTGGTT GGCCTGGGAA ACGCGCGGCC GGGGTTGA
 
Protein sequence
MSLSAWPVDP GLIVPFLAAI LLIELTPGPN MGYLAALSVV HGRRAGFYAV AGVTCGLAVY 
MFAAVFGLTE AFRLYRPLYE LLRWAGVAYL IWLAWDAWRA ADGHDPGADL LSRPWALFQR
GFLANILNPK AALFYVTLLP GFIAVDHGPP ARQALILGGL HVLVSIMIHG SIVLSADKAG
RLLARVASSA WVSRGLAISI LVVAIWLAWE TRGRG