Gene Caul_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3115 
Symbol 
ID5900570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3380447 
End bp3381871 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID641563618 
Productseryl-tRNA synthetase 
Protein accessionYP_001684740 
Protein GI167647077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.132725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA TCAAGGCCAT CCGCGACAAT CAGCAAGCCT TCGAAGCCGC GTGGTCGGCC 
AAGGGCCGCT CGGGCGCGGC CGCCGAGGCG GTCAAGCTGG ACGCCCTGCT GCGCGCCGCC
CAGACCGCGC TGCAGGAGGC CCAGGCCAAG CGCAACGAAA GCTCCAAGCT GATCGGCATG
GCCAAGGCCA AGAAGGACGA GGCCGAGGCC ACGCGCCTGA TGGCCGAGGT CGAGCACCTC
AAGGCCGTCA TGGCCTCGGC CGCCCAGACC GAGACCGAGG TCGGCGGCCA GCTGCGCGAC
CTGCTGGCCA GCCTGCCCAA CATCCCCGCG CCGGAAGTGC CGGCGGGCGA GGACGAGGCG
GGCAATGTCG AGATCCGCCG CTGGGGCGAC GCCTCCAAGC TGCCGGCCGG CCGCCTGAAC
AATCCCAAGG ACCACGTCGA TCTCGGCGCG GCCCTGGGCG GCATGGACTT CGAAGCCGCC
GCCCGCATGA GCGGCGCGCG CTTCGTGGTG CTGAAGGGCC AGATCGCCCG GCTGGAGCGG
GCTCTGGGCC AGTTCATGCT GGACCTGCAA ACGGTGCAGC ACGGCTACAC CGAGGTTTCG
CCGCCGCTGT TGGTCAAGGA CGAGGCGCTG TTCGGGACGG GGCAACTGCC GAAGTTCAAG
GCTGACCTGT TCAAGACGTC TGAACAAAAT TGGGTCGAAC GGCTCGATGA GCAGATCGCT
CTACGAGTTC CTCCACTCCT GAATATTACT CAGACCGACG TTGTCGAGAA TCTGAAGGGC
TTGAGAGCTG CGGCTAGTAT GGACGAGCAA GCCGCCCGCT GGCTCATCCC CACCGCCGAG
GTCTCCCTCA CCAATATCGT GCGCGAGCAG ATCACCGACG AGGCCGAGCT GCCGCTGCGG
ATGACCGCCC TGACGCCGTC TTTCCGCTCG GAAGCCGGCG CCAGCGGCCG CGACACGCGC
GGCATGATCC GCCAGCACCA GTTCTACAAG GTCGAGCTGG TCTCGATCAC CACGCCCGAC
CAGTCCGACG AAGAGCACGA GCGCATGGTC GGTTGCGCCG AGGCGGTGCT GAAGGCGCTG
GAGCTGCCGT TCCGCACCAT GCTGCTGTGC ACCGGCGACA TGGGCTTTGG CGCCAAGAAG
ACCTACGACC TGGAAGTCTG GCTGCCCTCG CAAAACACCT ATCGCGAGAT CAGCTCGTGC
TCCAACTGCG GCGACTTCCA GGCCCGCCGC ATGGACGCCC GCTTCAAGAA GGTCGGCGAG
AAGGGCGCGC GCTACGTCCA CACCCTGAAC GGCTCGGGCC TAGCCGTCGG CCGCACCCTG
GTGGCCGTGC TGGAGAACTA TCAGGACGAG ACCGGCCGGA TCACCGTGCC GGCCGTGCTG
GTCCCCTACA TGGGCGGCGT GACGCATATC GGGGGCGAGG CGTGA
 
Protein sequence
MHDIKAIRDN QQAFEAAWSA KGRSGAAAEA VKLDALLRAA QTALQEAQAK RNESSKLIGM 
AKAKKDEAEA TRLMAEVEHL KAVMASAAQT ETEVGGQLRD LLASLPNIPA PEVPAGEDEA
GNVEIRRWGD ASKLPAGRLN NPKDHVDLGA ALGGMDFEAA ARMSGARFVV LKGQIARLER
ALGQFMLDLQ TVQHGYTEVS PPLLVKDEAL FGTGQLPKFK ADLFKTSEQN WVERLDEQIA
LRVPPLLNIT QTDVVENLKG LRAAASMDEQ AARWLIPTAE VSLTNIVREQ ITDEAELPLR
MTALTPSFRS EAGASGRDTR GMIRQHQFYK VELVSITTPD QSDEEHERMV GCAEAVLKAL
ELPFRTMLLC TGDMGFGAKK TYDLEVWLPS QNTYREISSC SNCGDFQARR MDARFKKVGE
KGARYVHTLN GSGLAVGRTL VAVLENYQDE TGRITVPAVL VPYMGGVTHI GGEA