Gene Caul_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3060 
Symbol 
ID5900515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3321694 
End bp3322548 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID641563562 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001684685 
Protein GI167647022 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGG CGTTTATCGG CCTGGGCGTG ATGGGCTTTC CGATGGCCGG CCATCTGAAG 
GCCGCCGGTC ATGAGGTGAC GGTCTTCAAT CGCAGCCCGG ACAAGGCCGC GCGCTGGGTC
GAGAAGCACG GCGGCGCCGC GAAGCCGACC ATCGCCGAGG CCGTGGCGGG GGCCGGACTG
GTCTGCCTGT GCGTGGGCAA TGACGACGAC GTCCGCGACG TCGTGGCGCA GGTCCTGCCC
GCGATGGGAG AGGGCGGCGT GATCGTCGAC CACACCACGA CCTCGGCCAC CGTGGCCCGC
GAGATGGACG CCGCCGCTCG CGCCGTCGGC CGCTGGTTCA TCGACGCCCC GGTGTCGGGC
GGCCAGGCCG GGGCCGAGAA CGGCCAGCTG ACCGTCATGG CCGGCGGCGA CCCGGCGGCC
TACGCCCGGG TCGAGCCGGT GCTGATGAGC TACGCCAAGG CCATCCGCCT GATGGGCCCG
TCGGGGGCGG GCCAGTTGAC CAAGATGTGC AACCAGATCG CCATCGCCGG CGTCGTCCAG
GGCGTGGCCG AGGCCCTGCA TTTCGCCAAG CGCGCCGGCC TGCCGACCGA TGACGTGCTG
GCGGCGATCT CCAAGGGCAG CGCCCAGTCC TGGCAGATGG AGAACCGCTG GAAGACCATG
GCCGAAGGCA AGTTCGACTT CGGCTTCGCC GTCGACTGGA TGCGCAAGGA TCTCGGCATC
GCCCTGGCCG AGGCGGCGGT GAACGGCGCC AAGCTCGAGG CCACGGCGCT GATCGACGGG
TTCTACCAAG AGGTTCAGGC GATGGGCGGT CATCGGTGGG ATACCTCGAG CCTCGTGGCG
CGGTTGGAGA AGTAG
 
Protein sequence
MKTAFIGLGV MGFPMAGHLK AAGHEVTVFN RSPDKAARWV EKHGGAAKPT IAEAVAGAGL 
VCLCVGNDDD VRDVVAQVLP AMGEGGVIVD HTTTSATVAR EMDAAARAVG RWFIDAPVSG
GQAGAENGQL TVMAGGDPAA YARVEPVLMS YAKAIRLMGP SGAGQLTKMC NQIAIAGVVQ
GVAEALHFAK RAGLPTDDVL AAISKGSAQS WQMENRWKTM AEGKFDFGFA VDWMRKDLGI
ALAEAAVNGA KLEATALIDG FYQEVQAMGG HRWDTSSLVA RLEK